RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 DCPSQ96C86 337 aaKnown RBP14□□□□□ -0.17
CLK3-215ENST00000564353 RAB3IPQ96QF0 476 aaPredicted RBP14□□□□□ -0.17
CLK3-215ENST00000564353 DHRS4Q9BTZ2 278 aa14□□□□□ -0.17
CLK3-215ENST00000564353 EIF2AQ9BY44 585 aaKnown RBP14□□□□□ -0.17
CLK3-215ENST00000564353 TRIM55Q9BYV6 548 aa14□□□□□ -0.17
CLK3-215ENST00000564353 PCDH18Q9HCL0 1135 aa14□□□□□ -0.17
CLK3-215ENST00000564353 PRMT7Q9NVM4 692 aaPredicted RBP14□□□□□ -0.17
CLK3-215ENST00000564353 IQANK1A0A1B0GTG1 560 aa14□□□□□ -0.17
CLK3-215ENST00000564353 IL18RAPO95256 599 aa14□□□□□ -0.17
CLK3-215ENST00000564353 LMO2P25791 158 aa14□□□□□ -0.17
CLK3-215ENST00000564353 SERPINB4P48594 390 aa14□□□□□ -0.17
CLK3-215ENST00000564353 TMPRSS15P98073 1019 aa14□□□□□ -0.17
CLK3-215ENST00000564353 NOL9Q5SY16 702 aaKnown RBP14□□□□□ -0.17
CLK3-215ENST00000564353 RINLQ6ZS11 566 aa14□□□□□ -0.17
CLK3-215ENST00000564353 FAM131BQ86XD5 332 aa14□□□□□ -0.17
CLK3-215ENST00000564353 ARID3BQ8IVW6 561 aaPredicted RBP14□□□□□ -0.17
CLK3-215ENST00000564353 SLC44A1Q8WWI5 657 aa14□□□□□ -0.17
CLK3-215ENST00000564353 LGMNQ99538 433 aa14□□□□□ -0.17
CLK3-215ENST00000564353 C20orf27Q9GZN8 174 aa14□□□□□ -0.17
CLK3-215ENST00000564353 NMUR2Q9GZQ4 415 aa14□□□□□ -0.17
CLK3-215ENST00000564353 KCNK13Q9HB14 408 aa14□□□□□ -0.17
CLK3-215ENST00000564353 ACSS2Q9NR19 701 aa14□□□□□ -0.17
CLK3-215ENST00000564353 WDR35Q9P2L0 1181 aa14□□□□□ -0.17
CLK3-215ENST00000564353 GJD2Q9UKL4 321 aa14□□□□□ -0.17
CLK3-215ENST00000564353 TTLL3Q9Y4R7 772 aa14□□□□□ -0.17
CLK3-215ENST00000564353 HAUS5O94927 633 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 OSBPP22059 807 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 IGFBP6P24592 240 aaPredicted RBP13.99□□□□□ -0.17
CLK3-215ENST00000564353 ABCG1P45844 678 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 HDAC4P56524 1084 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 PITX1P78337 314 aaPredicted RBP13.99□□□□□ -0.17
CLK3-215ENST00000564353 TTLL4Q14679 1199 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 CCDC185Q8N715 623 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 CADM1Q9BY67 442 aaKnown RBP13.99□□□□□ -0.17
CLK3-215ENST00000564353 SHCBP1LQ9BZQ2 653 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 SETD4Q9NVD3 440 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 ENO1P06733 434 aaKnown RBP13.99□□□□□ -0.17
CLK3-215ENST00000564353 AMPD1P23109 780 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 CYP2F1P24903 491 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 SESN2P58004 480 aaPredicted RBP13.99□□□□□ -0.17
CLK3-215ENST00000564353 KDSRQ06136 332 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 CCDC15Q0P6D6 951 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 CHI3L2Q15782 390 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 TAZQ16635 292 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 CTC1Q2NKJ3 1217 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 CTU1Q7Z7A3 348 aaKnown RBP13.99□□□□□ -0.17
CLK3-215ENST00000564353 MICAL1Q8TDZ2 1067 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 OPTNQ96CV9 577 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 APOPT1Q96IL0 206 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 CLPTM1LQ96KA5 538 aa13.99□□□□□ -0.17
CLK3-215ENST00000564353 C2CD2LO14523 706 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 TSPAN1O60635 241 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 ETV4P43268 484 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 SOWAHAQ2M3V2 549 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 OLFML1Q6UWY5 402 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 UNC5AQ6ZN44 842 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 HACE1Q8IYU2 909 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 SHKBP1Q8TBC3 707 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 KHSRPQ92945 711 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLK3-215ENST00000564353 FAM149B1Q96BN6 582 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 LENG1Q96BZ8 264 aaPredicted RBP13.98□□□□□ -0.17
CLK3-215ENST00000564353 POPDC2Q9HBU9 364 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 CCDC78A2IDD5 438 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 A8MXQ7 604 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 LYPLA1O75608 230 aaPredicted RBP13.98□□□□□ -0.17
CLK3-215ENST00000564353 GOT1P17174 413 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 ALDH18A1P54886 795 aaKnown RBP13.98□□□□□ -0.17
CLK3-215ENST00000564353 MRPS5P82675 430 aaKnown RBP13.98□□□□□ -0.17
CLK3-215ENST00000564353 RBP5P82980 135 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 ARHGAP1Q07960 439 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 BST1Q10588 318 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 KPNB1Q14974 876 aaKnown RBP13.98□□□□□ -0.17
CLK3-215ENST00000564353 KCNT2Q6UVM3 1135 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 BZW1Q7L1Q6 419 aaKnown RBP13.98□□□□□ -0.17
CLK3-215ENST00000564353 GPC2Q8N158 579 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 NDUFAF2Q8N183 169 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 OSMRQ99650 979 aa13.98□□□□□ -0.17
CLK3-215ENST00000564353 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.98□□□□□ -0.17
CLK3-215ENST00000564353 A0A0G2JLL6 359 aaPredicted RBP13.97□□□□□ -0.17
CLK3-215ENST00000564353 GYG2O15488 501 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 KRT36O76013 467 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 P4HA1P13674 534 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 STIP1P31948 543 aaKnown RBP13.97□□□□□ -0.17
CLK3-215ENST00000564353 NEK3P51956 506 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 PGGT1BP53609 377 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 TFDP2Q14188 446 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 RGS9BPQ6ZS82 235 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 PRRT2Q7Z6L0 340 aaPredicted RBP13.97□□□□□ -0.17
CLK3-215ENST00000564353 ADAM32Q8TC27 787 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 WDR60Q8WVS4 1066 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 NXF3Q9H4D5 531 aaKnown RBP13.97□□□□□ -0.17
CLK3-215ENST00000564353 GBA2Q9HCG7 927 aaPredicted RBP13.97□□□□□ -0.17
CLK3-215ENST00000564353 SLC5A4Q9NY91 659 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 EFR3BQ9Y2G0 817 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 BPTFQ12830 3046 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 PAPPA2Q9BXP8 1791 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 WDR27A2RRH5 827 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 SLC15A5A6NIM6 579 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 USP12O75317 370 aa13.97□□□□□ -0.17
CLK3-215ENST00000564353 DLDP09622 509 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms