RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 TDGF1P13385 188 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 CXCL12P48061 93 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 CCR3P51677 355 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 MYL5Q02045 173 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 C12orf40Q86WS4 652 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 TMEM25Q86YD3 366 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 EDEM1Q92611 657 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 EXOC4Q96A65 974 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 MARCH2Q9P0N8 246 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 CYTH4Q9UIA0 394 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 USP34Q70CQ2 3546 aa29.65■■■□□ 2.34
NME3-203ENST00000563367 KLKB1P03952 638 aa29.64■■■□□ 2.34
NME3-203ENST00000563367 HMBSP08397 361 aa29.64■■■□□ 2.34
NME3-203ENST00000563367 RPL34P49207 117 aaKnown RBP29.64■■■□□ 2.34
NME3-203ENST00000563367 NCAPHQ15003 741 aa29.64■■■□□ 2.34
NME3-203ENST00000563367 KLHDC7AQ5VTJ3 777 aa29.64■■■□□ 2.34
NME3-203ENST00000563367 Q6ZNB5 142 aa29.64■■■□□ 2.34
NME3-203ENST00000563367 NELL1Q92832 810 aa29.64■■■□□ 2.34
NME3-203ENST00000563367 LSM14BQ9BX40 385 aaKnown RBP29.64■■■□□ 2.34
NME3-203ENST00000563367 SPHK2Q9NRA0 654 aa29.64■■■□□ 2.34
NME3-203ENST00000563367 LSM7Q9UK45 103 aaKnown RBP29.64■■■□□ 2.34
NME3-203ENST00000563367 FHOD1Q9Y613 1164 aa29.64■■■□□ 2.34
NME3-203ENST00000563367 RNF40O75150 1001 aa29.63■■■□□ 2.33
NME3-203ENST00000563367 CLCN1P35523 988 aa29.63■■■□□ 2.33
NME3-203ENST00000563367 COG7P83436 770 aa29.63■■■□□ 2.33
NME3-203ENST00000563367 MESP2Q0VG99 397 aa29.63■■■□□ 2.33
NME3-203ENST00000563367 MEA1Q16626 185 aa29.63■■■□□ 2.33
NME3-203ENST00000563367 MIS12Q9H081 205 aa29.63■■■□□ 2.33
NME3-203ENST00000563367 HSD3B7Q9H2F3 369 aa29.63■■■□□ 2.33
NME3-203ENST00000563367 MYO18AQ92614 2054 aaKnown RBP29.63■■■□□ 2.33
NME3-203ENST00000563367 ZFHX2Q9C0A1 2572 aaPredicted RBP29.62■■■□□ 2.33
NME3-203ENST00000563367 SLC12A8A0AV02 714 aa29.62■■■□□ 2.33
NME3-203ENST00000563367 HOXC13P31276 330 aa29.62■■■□□ 2.33
NME3-203ENST00000563367 GAD2Q05329 585 aa29.62■■■□□ 2.33
NME3-203ENST00000563367 IRGQQ8WZA9 623 aa29.62■■■□□ 2.33
NME3-203ENST00000563367 NAA15Q9BXJ9 866 aaKnown RBP29.62■■■□□ 2.33
NME3-203ENST00000563367 ANTXRLA6NF34 631 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 HOXC11O43248 304 aaPredicted RBP29.61■■■□□ 2.33
NME3-203ENST00000563367 DRAP1Q14919 205 aaPredicted RBP29.61■■■□□ 2.33
NME3-203ENST00000563367 SLC47A2Q86VL8 602 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 SFTPA1Q8IWL2 248 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 SCUBE3Q8IX30 993 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 FAM71AQ8IYT1 594 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 STK32AQ8WU08 396 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 SLC4A5Q9BY07 1137 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 ST7Q9NRC1 585 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 ABCC13Q9NSE7 274 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 OLA1Q9NTK5 396 aaKnown RBP29.61■■■□□ 2.33
NME3-203ENST00000563367 POLR3BQ9NW08 1133 aaPredicted RBP29.61■■■□□ 2.33
NME3-203ENST00000563367 SFMBT1Q9UHJ3 866 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 STRIP2Q9ULQ0 834 aa29.61■■■□□ 2.33
NME3-203ENST00000563367 K7EQS6 105 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 K7ESF4 209 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 FBXO21O94952 628 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 UCHL3P15374 230 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 KLK7P49862 253 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 COPB1P53618 953 aaKnown RBP29.6■■■□□ 2.33
NME3-203ENST00000563367 PTK2Q05397 1052 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 RAPGEF1Q13905 1077 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 ANO4Q32M45 955 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 FBXO43Q4G163 708 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 ANO6Q4KMQ2 910 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 SMYD5Q6GMV2 418 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 FMNL3Q8IVF7 1028 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 ETFBKMTQ8IXQ9 262 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 WDTC1Q8N5D0 677 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 AOPEPQ8N6M6 819 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 NAT16Q8N8M0 369 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 RNF139Q8WU17 664 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 PNKPQ96T60 521 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 ZSCAN32Q9NX65 697 aa29.6■■■□□ 2.33
NME3-203ENST00000563367 LIMA1Q9UHB6 759 aaKnown RBP29.6■■■□□ 2.33
NME3-203ENST00000563367 PAPSS2O95340 614 aaPredicted RBP29.59■■■□□ 2.33
NME3-203ENST00000563367 ZNF18P17022 549 aa29.59■■■□□ 2.33
NME3-203ENST00000563367 CORO1AP31146 461 aaKnown RBP29.59■■■□□ 2.33
NME3-203ENST00000563367 EIF2DP41214 584 aaKnown RBP29.59■■■□□ 2.33
NME3-203ENST00000563367 DMWDQ09019 674 aa29.59■■■□□ 2.33
NME3-203ENST00000563367 TPGS1Q6ZTW0 290 aa29.59■■■□□ 2.33
NME3-203ENST00000563367 ASCL5Q7RTU5 278 aa29.59■■■□□ 2.33
NME3-203ENST00000563367 PHTF2Q8N3S3 785 aa29.59■■■□□ 2.33
NME3-203ENST00000563367 ZBTB44Q8NCP5 570 aa29.59■■■□□ 2.33
NME3-203ENST00000563367 NKD2Q969F2 451 aaPredicted RBP29.59■■■□□ 2.33
NME3-203ENST00000563367 P2RY11Q96G91 374 aa29.59■■■□□ 2.33
NME3-203ENST00000563367 PCDHGC3Q9UN70 934 aa29.59■■■□□ 2.33
NME3-203ENST00000563367 CHURC1-FNTBB4DL54 471 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 LTFP02788 710 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 ACADSBP45954 432 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 KDSRQ06136 332 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 PPP2R5DQ14738 602 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 ZC3H14Q6PJT7 736 aaKnown RBP29.58■■■□□ 2.33
NME3-203ENST00000563367 TMEM110Q86TL2 294 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 PASD1Q8IV76 773 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 RPLP0P6Q8NHW5 317 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 GANQ9H2C0 597 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 PLCB1Q9NQ66 1216 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 TJP2Q9UDY2 1190 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 AGO1Q9UL18 857 aaKnown RBP29.58■■■□□ 2.33
NME3-203ENST00000563367 PCDHGA2Q9Y5H1 932 aa29.58■■■□□ 2.33
NME3-203ENST00000563367 E5RJQ4 531 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 MSI1O43347 362 aaKnown RBP29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms