RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 CCHCR1Q8TD31 782 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 C2orf15Q8WU43 125 aaKnown RBP9.92□□□□□ -0.82
CDH13-205ENST00000562307 BCL7CQ8WUZ0 217 aaPredicted RBP9.92□□□□□ -0.82
CDH13-205ENST00000562307 NTAN1Q96AB6 310 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 TTPALQ9BTX7 342 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 TMEM106CQ9BVX2 250 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 CALN1Q9BXU9 219 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 MAK16Q9BXY0 300 aaKnown RBP9.92□□□□□ -0.82
CDH13-205ENST00000562307 TXLNGYQ9BZA5 131 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 ACBD3Q9H3P7 528 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 WDR6Q9NNW5 1121 aaKnown RBP9.92□□□□□ -0.82
CDH13-205ENST00000562307 COMMD8Q9NX08 183 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 AP4E1Q9UPM8 1137 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 NAALADL1Q9UQQ1 740 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 BACE2Q9Y5Z0 518 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 COL4A6Q14031 1691 aa9.92□□□□□ -0.82
CDH13-205ENST00000562307 NLRC5Q86WI3 1866 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 FAM92AA1XBS5 289 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 NT5C1B-RDH14C9J2C7 533 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 CAPN9O14815 690 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 TRIM66O15016 1216 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 RRP9O43818 475 aaKnown RBP9.91□□□□□ -0.82
CDH13-205ENST00000562307 BAIAP3O94812 1187 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 UPP2O95045 317 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 IGLV3-25P01717 112 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 AMHP03971 560 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 CSF2RAP15509 400 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 ZFXP17010 805 aaPredicted RBP9.91□□□□□ -0.82
CDH13-205ENST00000562307 TGM2P21980 687 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 ADRA1BP35368 520 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 CXCR3P49682 368 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 CDR1P51861 262 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 SLC5A3P53794 718 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 OTUD4Q01804 1114 aaKnown RBP9.91□□□□□ -0.82
CDH13-205ENST00000562307 CAV1Q03135 178 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 DEUP1Q05D60 604 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 NOMO1Q15155 1222 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 USP41Q3LFD5 358 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 RTP2Q5QGT7 225 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 RHBDF2Q6PJF5 856 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 RSPO2Q6UXX9 243 aaPredicted RBP9.91□□□□□ -0.82
CDH13-205ENST00000562307 TMEM173Q86WV6 379 aaPredicted RBP9.91□□□□□ -0.82
CDH13-205ENST00000562307 CEP57Q86XR8 500 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 CMTR2Q8IYT2 770 aaKnown RBP9.91□□□□□ -0.82
CDH13-205ENST00000562307 TMEM199Q8N511 208 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 CCDC185Q8N715 623 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 PLD5Q8N7P1 536 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 TSEN2Q8NCE0 465 aaKnown RBP9.91□□□□□ -0.82
CDH13-205ENST00000562307 BBOF1Q8ND07 529 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 SCAMP5Q8TAC9 235 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 SPPL2BQ8TCT7 592 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 LRRC45Q96CN5 670 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 SNF8Q96H20 258 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 IGSF21Q96ID5 467 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 SPATA17Q96L03 361 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 CEP295NLQ96MC4 621 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 GDAP1L1Q96MZ0 367 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 KCTD15Q96SI1 283 aaPredicted RBP9.91□□□□□ -0.82
CDH13-205ENST00000562307 FAM118BQ9BPY3 351 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 TRIM31Q9BZY9 425 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 ABCC13Q9NSE7 274 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 PIGVQ9NUD9 493 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 GPATCH2LQ9NWQ4 482 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 FBXW11Q9UKB1 542 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 SCML2Q9UQR0 700 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 ZNF148Q9UQR1 794 aa9.91□□□□□ -0.82
CDH13-205ENST00000562307 FNDC1Q4ZHG4 1894 aaPredicted RBP9.91□□□□□ -0.82
CDH13-205ENST00000562307 MICAL3Q7RTP6 2002 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 PTPRDP23468 1912 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 MTMR11A4FU01 709 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 AGPSO00116 658 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 APOL1O14791 398 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 PPFIA2O75334 1257 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 VNN2O95498 520 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 KRT14P02533 472 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 HSPA1AP0DMV8 641 aaKnown RBP9.9□□□□□ -0.82
CDH13-205ENST00000562307 HSPA1BP0DMV9 641 aaKnown RBP9.9□□□□□ -0.82
CDH13-205ENST00000562307 HAPLN1P10915 354 aaPredicted RBP9.9□□□□□ -0.82
CDH13-205ENST00000562307 NCAM1P13591 858 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 RAG1P15918 1043 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 PECAM1P16284 738 aaPredicted RBP9.9□□□□□ -0.82
CDH13-205ENST00000562307 STIP1P31948 543 aaKnown RBP9.9□□□□□ -0.82
CDH13-205ENST00000562307 HCAR3P49019 387 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 NR2C2P49116 596 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 ZNF135P52742 658 aaPredicted RBP9.9□□□□□ -0.82
CDH13-205ENST00000562307 PLTPP55058 493 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 WDR5P61964 334 aaKnown RBP9.9□□□□□ -0.82
CDH13-205ENST00000562307 YWHAGP61981 247 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDH13-205ENST00000562307 DYNLT1P63172 113 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 SEMA3BQ13214 749 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 SLC8B1Q6J4K2 584 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 KCNT2Q6UVM3 1135 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 ZNF365Q70YC5 407 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 TMC3Q7Z5M5 1100 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 SCD5Q86SK9 330 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 MON1AQ86VX9 555 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 FAM131BQ86XD5 332 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 SCN4BQ8IWT1 228 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 GPR65Q8IYL9 337 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 KRT222Q8N1A0 295 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms