RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ITIH2P19823 946 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 IL4RP24394 825 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 HSPA9P38646 679 aaKnown RBP17.82■□□□□ 0.44
HDDC3-206ENST00000561036 RPL21P46778 160 aaKnown RBP17.82■□□□□ 0.44
HDDC3-206ENST00000561036 RABGGTBP53611 331 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 SLC5A3P53794 718 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 CAV1Q03135 178 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 USP41Q3LFD5 358 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 ANKRD20A8PQ5CZ79 823 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 ZC3H12AQ5D1E8 599 aaKnown RBP17.82■□□□□ 0.44
HDDC3-206ENST00000561036 BSPRYQ5W0U4 402 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 ALS2CLQ60I27 953 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 SLC9A4Q6AI14 798 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 RNF168Q8IYW5 571 aaPredicted RBP17.82■□□□□ 0.44
HDDC3-206ENST00000561036 ARHGAP18Q8N392 663 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 ALLCQ8N6M5 410 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 ACTL9Q8TC94 416 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.82■□□□□ 0.44
HDDC3-206ENST00000561036 IGSF21Q96ID5 467 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 CEP295NLQ96MC4 621 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 TRIM31Q9BZY9 425 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 FBXO44Q9H4M3 255 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 ABCC13Q9NSE7 274 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 HCSTQ9UBK5 93 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 HPCAL4Q9UM19 191 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 SCML2Q9UQR0 700 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 ZNF148Q9UQR1 794 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 BACE2Q9Y5Z0 518 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 VWA8A3KMH1 1905 aa17.82■□□□□ 0.44
HDDC3-206ENST00000561036 FAM153BP0C7A2 387 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 ITGB8P26012 769 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 ZNF135P52742 658 aaPredicted RBP17.81■□□□□ 0.44
HDDC3-206ENST00000561036 WDR5P61964 334 aaKnown RBP17.81■□□□□ 0.44
HDDC3-206ENST00000561036 OTUD4Q01804 1114 aaKnown RBP17.81■□□□□ 0.44
HDDC3-206ENST00000561036 SCAPQ12770 1279 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 CALCOCO2Q13137 446 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 MMRN1Q13201 1228 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 CA9Q16790 459 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 FAM153CQ494X1 144 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 SPDYCQ5MJ68 293 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 RTP2Q5QGT7 225 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 ZDHHC24Q6UX98 284 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 SCN4BQ8IWT1 228 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 NUP93Q8N1F7 819 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 CCDC185Q8N715 623 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 SLC7A14Q8TBB6 771 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 BCL7CQ8WUZ0 217 aaPredicted RBP17.81■□□□□ 0.44
HDDC3-206ENST00000561036 PIK3R5Q8WYR1 880 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 ART4Q93070 314 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 SNF8Q96H20 258 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 ZNF558Q96NG5 402 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 FMO2Q99518 471 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 DHX35Q9H5Z1 703 aaKnown RBP17.81■□□□□ 0.44
HDDC3-206ENST00000561036 RC3H2Q9HBD1 1191 aaKnown RBP17.81■□□□□ 0.44
HDDC3-206ENST00000561036 IL23AQ9NPF7 189 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 GPATCH2LQ9NWQ4 482 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 IL37Q9NZH6 218 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 MTRF1LQ9UGC7 380 aaKnown RBP17.81■□□□□ 0.44
HDDC3-206ENST00000561036 ASIC3Q9UHC3 531 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 FAM153AQ9UHL3 310 aa17.81■□□□□ 0.44
HDDC3-206ENST00000561036 COL4A6Q14031 1691 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 NT5C1B-RDH14C9J2C7 533 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 APOL1O14791 398 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 MCF2LO15068 1137 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 RTN3O95197 1032 aaPredicted RBP17.8■□□□□ 0.44
HDDC3-206ENST00000561036 KRT14P02533 472 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 CPB1P15086 417 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 ATF2P15336 505 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 LAG3P18627 525 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 KLRC2P26717 231 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 ADRA1BP35368 520 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 NR2C2P49116 596 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 CDR1P51861 262 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 ATXN1P54253 815 aaKnown RBP17.8■□□□□ 0.44
HDDC3-206ENST00000561036 DYNLT1P63172 113 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 MTMR3Q13615 1198 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 NOMO1Q15155 1222 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 ARL13BQ3SXY8 428 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 KCNT2Q6UVM3 1135 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 GSTA5Q7RTV2 222 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 UBE2Q1Q7Z7E8 422 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 MON1AQ86VX9 555 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 TMEM173Q86WV6 379 aaPredicted RBP17.8■□□□□ 0.44
HDDC3-206ENST00000561036 FAM131BQ86XD5 332 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 KRT222Q8N1A0 295 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 P3H4Q92791 437 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 SPATA17Q96L03 361 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 KCTD15Q96SI1 283 aaPredicted RBP17.8■□□□□ 0.44
HDDC3-206ENST00000561036 TSPYL1Q9H0U9 437 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 NEUROG2Q9H2A3 272 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 WDR6Q9NNW5 1121 aaKnown RBP17.8■□□□□ 0.44
HDDC3-206ENST00000561036 MTMR10Q9NXD2 777 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 CALCOCO1Q9P1Z2 691 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 MTRRQ9UBK8 725 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 FBXW11Q9UKB1 542 aa17.8■□□□□ 0.44
HDDC3-206ENST00000561036 MTMR11A4FU01 709 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 H3BRJ5 948 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 RRP9O43818 475 aaKnown RBP17.79■□□□□ 0.44
HDDC3-206ENST00000561036 IVDP26440 423 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 ARL4AP40617 200 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms