RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 MON1AQ86VX9 555 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 KATNAL2Q8IYT4 538 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 RASGEF1CQ8N431 466 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 FAM172AQ8WUF8 416 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 EDEM1Q92611 657 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 GOLGA1Q92805 767 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 CAPZA3Q96KX2 299 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 PEBP4Q96S96 227 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 NCAPGQ9BPX3 1015 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 TRIM62Q9BVG3 475 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 CARD6Q9BX69 1037 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 EMILIN2Q9BXX0 1053 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 NKX2-4Q9H2Z4 354 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 NMUR1Q9HB89 426 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 NGRNQ9NPE2 291 aaKnown RBP7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 ENTPD7Q9NQZ7 604 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 ABCC13Q9NSE7 274 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 OSER1Q9NX31 292 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 RRN3Q9NYV6 651 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 CALCOCO1Q9P1Z2 691 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 RNF14Q9UBS8 474 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 PCSK1NQ9UHG2 260 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 MSRAQ9UJ68 235 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 USP18Q9UMW8 372 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 YIPF1Q9Y548 306 aa7.56□□□□□ -1.2
HMBOX1-214ENST00000560357 MTCL1Q9Y4B5 1905 aaKnown RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 A0A1W2PQH9 124 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 M0QYT0 321 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 PRRG1O14668 218 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 CAPN9O14815 690 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 ZRANB2O95218 330 aaKnown RBP eCLIP7.55□□□□□ -1.22e-6■■■□□ 16.1
HMBOX1-214ENST00000560357 SLU7O95391 586 aaKnown RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 C1RP00736 705 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 ADH1AP07327 375 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 KRT7P08729 469 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 ZDHHC11BP0C7U3 371 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 CSH1P0DML2 217 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 CSH2P0DML3 217 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 RARAP10276 462 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 NCAM1P13591 858 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 HMGA1P17096 107 aaKnown RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 DESP17661 470 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 RDXP35241 583 aaKnown RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 IRS1P35568 1242 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 GJC1P36383 396 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 ALDH1A3P47895 512 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 ATXN1P54253 815 aaKnown RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 EPHB3P54753 998 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 TWF1Q12792 350 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 TAF10Q12962 218 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 EIF4EBP2Q13542 120 aaPredicted RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 RAB30Q15771 203 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 BOLA3Q53S33 107 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 BTBD8Q5XKL5 378 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 PDE12Q6L8Q7 609 aaKnown RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 AADACL2Q6P093 401 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 SCYL2Q6P3W7 929 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 ZNF572Q7Z3I7 529 aaPredicted RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 RCOR2Q8IZ40 523 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 ARHGAP18Q8N392 663 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 CEP112Q8N8E3 955 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 KREMEN2Q8NCW0 462 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 CMASQ8NFW8 434 aaPredicted RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 EXD1Q8NHP7 514 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 ACTRT1Q8TDG2 376 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 MICAL1Q8TDZ2 1067 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 DQX1Q8TE96 717 aaKnown RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 RAPGEF5Q92565 580 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 FBXO32Q969P5 355 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 PGAP3Q96FM1 320 aaPredicted RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 MYRFLQ96LU7 910 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 ZWILCHQ9H900 591 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 CERS4Q9HA82 394 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 TLR8Q9NR97 1041 aaKnown RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 DDX56Q9NY93 547 aaKnown RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 CLIC5Q9NZA1 410 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 SMARCAL1Q9NZC9 954 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 EHD2Q9NZN4 543 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 GMIPQ9P107 970 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 FBXW11Q9UKB1 542 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 TTC7AQ9ULT0 858 aaPredicted RBP7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 STAP1Q9ULZ2 295 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 INSL5Q9Y5Q6 135 aa7.55□□□□□ -1.2
HMBOX1-214ENST00000560357 C3orf70A6NLC5 250 aaPredicted RBP7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 PI4K2BG5E9Z4 385 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 PRPSAP2O60256 369 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 LPXNO60711 386 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 CLASP2O75122 1294 aaKnown RBP7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 CSPG5O95196 566 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 GLUD1P00367 558 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 F9P00740 461 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 IGLV3-25P01717 112 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 KRT1P04264 644 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 RARGP13631 454 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 PAFAH1B1P43034 410 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 ARSEP51690 589 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 CLCN4P51793 760 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 DEUP1Q05D60 604 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 CKAP4Q07065 602 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms