RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 SHDQ96IW2 340 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 PPP1R13BQ96KQ4 1090 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 NLRP4Q96MN2 994 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 PTCHD1Q96NR3 888 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 MTG1Q9BT17 334 aaPredicted RBP7.47□□□□□ -1.21
ZEB1-216ENST00000559496 TRIM7Q9C029 511 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 KLHL25Q9H0H3 589 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 C2orf40Q9H1Z8 148 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 RMI1Q9H9A7 625 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 PDE11AQ9HCR9 933 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 XPNPEP3Q9NQH7 507 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 SETD4Q9NVD3 440 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 GGA2Q9UJY4 613 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 RAB21Q9UL25 225 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 AKT3Q9Y243 479 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 FRMD4BQ9Y2L6 1034 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 FAN1Q9Y2M0 1017 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 TRIM17Q9Y577 477 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 NRCAMQ92823 1304 aa7.47□□□□□ -1.21
ZEB1-216ENST00000559496 GOLGA6L9A6NEM1 432 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 TISP43B9A030 160 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 HNRNPDLO14979 420 aaKnown RBP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 ASAP2O43150 1006 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 EXOC3O60645 756 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 AKAP3O75969 853 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 KIAA0754O94854 1291 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 CD3EP07766 207 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 GJB1P08034 283 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 FERP16591 822 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 PSMC2P35998 433 aaKnown RBP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 AARSP49588 968 aaKnown RBP eCLIP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 CASP4P49662 377 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 LIG4P49917 911 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 EFNA5P52803 228 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 NAP1L1P55209 391 aaKnown RBP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 C1QTNF8P60827 252 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 NKX3-2P78367 333 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 ROR2Q01974 943 aaKnown RBP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 LAMB3Q13751 1172 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 PPP2R5DQ14738 602 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 PTPN21Q16825 1174 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 VWA3BQ502W6 1294 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 MIIPQ5JXC2 388 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 BEND6Q5SZJ8 279 aaPredicted RBP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 MARCH8Q5T0T0 291 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 SPECC1LQ69YQ0 1117 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 NFRKBQ6P4R8 1299 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 FRMD5Q7Z6J6 570 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 ADAT2Q7Z6V5 191 aaKnown RBP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 TRIM59Q8IWR1 403 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 FAM186BQ8IYM0 893 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 LINC01465Q8N7H1 131 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 MZB1Q8WU39 189 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 LMBR1Q8WVP7 490 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 ALS2CR12Q96Q35 445 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 CBWD1Q9BRT8 395 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 PARD6BQ9BYG5 372 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 METTL14Q9HCE5 456 aaKnown RBP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 KLC4Q9NSK0 619 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 DMAC2Q9NW81 257 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 UTP6Q9NYH9 597 aaKnown RBP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 HSPBP1Q9NZL4 362 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 ARMCX3Q9UH62 379 aaPredicted RBP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 DDX20Q9UHI6 824 aaKnown RBP7.46□□□□□ -1.21
ZEB1-216ENST00000559496 PCDHB10Q9UN67 800 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 PTCH2Q9Y6C5 1203 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 SIP14410 1827 aa7.46□□□□□ -1.21
ZEB1-216ENST00000559496 C17orf102A2RUQ5 167 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 MBLAC1A4D2B0 266 aaPredicted RBP7.46□□□□□ -1.22
ZEB1-216ENST00000559496 NUDT19A8MXV4 375 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 ANKRD63C9JTQ0 380 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 INO80B-WBP1J3KQ70 363 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 MSCO60682 206 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 PPM1BO75688 479 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 RASSF9O75901 435 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 PIGRP01833 764 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 VTNP04004 478 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 PRKCBP05771 671 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 GNAT1P11488 350 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 IFNGR1P15260 489 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 CST5P28325 142 aaPredicted RBP7.46□□□□□ -1.22
ZEB1-216ENST00000559496 PBX1P40424 430 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 CDR1P51861 262 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 EPHB3P54753 998 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 PTENP60484 403 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 SSPNQ14714 243 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 NAA25Q14CX7 972 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 SNCBQ16143 134 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 PPP2R5EQ16537 467 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 MAPK6Q16659 721 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 DCAF17Q5H9S7 520 aaPredicted RBP7.46□□□□□ -1.22
ZEB1-216ENST00000559496 TCERG1LQ5VWI1 586 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 SLC39A4Q6P5W5 647 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 SLC30A9Q6PML9 568 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 CXCL17Q6UXB2 119 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 ARHGAP22Q7Z5H3 698 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 C7orf31Q8N865 590 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 XXYLT1Q8NBI6 393 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 MSANTD4Q8NCY6 345 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 LSM14AQ8ND56 463 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms