RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 BAIAP3O94812 1187 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 LTFP02788 710 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 FYNP06241 537 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 S100A9P06702 114 aaKnown RBP14.35□□□□□ -0.11
SPG11-210ENST00000558319 RPL10AP62906 217 aaKnown RBP14.35□□□□□ -0.11
SPG11-210ENST00000558319 LRRC6Q86X45 466 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 VWA5AO00534 786 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 STX7O15400 261 aaKnown RBP14.35□□□□□ -0.11
SPG11-210ENST00000558319 GLRA3O75311 464 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 PEX5P50542 639 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 DDR2Q16832 855 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 ATG14Q6ZNE5 492 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 TRAPPC11Q7Z392 1133 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 TINF2Q9BSI4 451 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 RHBGQ9H310 441 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 TMCC3Q9ULS5 477 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 KDM6BO15054 1643 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 SLC34A1Q06495 639 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 KBTBD12Q3ZCT8 623 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 PERM1Q5SV97 790 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 CACHD1Q5VU97 1274 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 ACER1Q8TDN7 264 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 PACSIN1Q9BY11 444 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 SLC9A8Q9Y2E8 581 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 C15orf41Q9Y2V0 281 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 TNNI3P19429 210 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 RGS4P49798 205 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 AKR1D1P51857 326 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 TRAF3Q13114 568 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 ATP6AP1LQ52LC2 224 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 WDR60Q8WVS4 1066 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 RMND5BQ96G75 393 aaPredicted RBP14.35□□□□□ -0.11
SPG11-210ENST00000558319 NEO1Q92859 1461 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 CNTNAP2Q9UHC6 1331 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 KDM5CP41229 1560 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 GOLGA8TH3BQL2 631 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 CYB561D2O14569 222 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 ERVK-10P10266 1014 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 PIK3R1P27986 724 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 MAPK7Q13164 816 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 NRF1Q16656 503 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 CYP2R1Q6VVX0 501 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 KRT73Q86Y46 540 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 POU5F2Q8N7G0 328 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 FEZF2Q8TBJ5 459 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 FAM45AQ8TCE6 357 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 RMI1Q9H9A7 625 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 ARMCX1Q9P291 453 aa14.35□□□□□ -0.11
SPG11-210ENST00000558319 TRMT6Q9UJA5 497 aaKnown RBP14.35□□□□□ -0.11
SPG11-210ENST00000558319 SHANK2Q9UPX8 1470 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 MED26O95402 600 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 TMEM253P0C7T8 217 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 CPT1AP50416 773 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 CACTIN-AS1Q8N1I8 211 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 SCFD2Q8WU76 684 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 TPD52L3Q96J77 140 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 VPS33BQ9H267 617 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 CDC42EP4Q9H3Q1 356 aaKnown RBP14.34□□□□□ -0.11
SPG11-210ENST00000558319 C2CD2Q9Y426 696 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 WDR19Q8NEZ3 1342 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 DGAT1O75907 488 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 ATG7O95352 703 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 CKBP12277 381 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 PTK6Q13882 451 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 TRIM65Q6PJ69 517 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 CES3Q6UWW8 571 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 JMJD4Q9H9V9 463 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 NT5MQ9NPB1 228 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 DUSP12Q9UNI6 340 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 RPS6KL1Q9Y6S9 549 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 TMEM150BA6NC51 233 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 ERI2A8K979 691 aaKnown RBP14.34□□□□□ -0.11
SPG11-210ENST00000558319 BTN3A3O00478 584 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 HS6ST1O60243 411 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 CSF1RP07333 972 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 DSG3P32926 999 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 NOTUMQ6P988 496 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 SLC13A5Q86YT5 568 aaPredicted RBP14.34□□□□□ -0.11
SPG11-210ENST00000558319 NEDD1Q8NHV4 660 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 CLIP3Q96DZ5 547 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 MXRA8Q9BRK3 442 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 IQCMA0A1B0GVH7 501 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 SOAT2O75908 522 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 ATP4AP20648 1035 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 KPNA1P52294 538 aaPredicted RBP14.34□□□□□ -0.11
SPG11-210ENST00000558319 PTCH1Q13635 1447 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 BMPR2Q13873 1038 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 PHKG1Q16816 387 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 C3orf67Q6ZVT6 689 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 DET1Q7L5Y6 550 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 RNF180Q86T96 592 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 DENND6AQ8IWF6 608 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 EMC1Q8N766 993 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 LRRN4CLQ8ND94 238 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 SLITRK1Q96PX8 696 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 COPS7BQ9H9Q2 264 aaPredicted RBP14.34□□□□□ -0.11
SPG11-210ENST00000558319 GNG14A0A1W2PPG7 69 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 FKBP6O75344 327 aa14.34□□□□□ -0.11
SPG11-210ENST00000558319 SEMA3DO95025 777 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms