RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 AK8Q96MA6 479 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 ACCSQ96QU6 501 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 MMS19Q96T76 1030 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 ACOX2Q99424 681 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 BBS2Q9BXC9 721 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 NACA2Q9H009 215 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 SNX25Q9H3E2 840 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 IL21RQ9HBE5 538 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 CRTAC1Q9NQ79 661 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.5□□□□□ -1.53
SPG11-208ENST00000558155 COMMD8Q9NX08 183 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 RBAKQ9NYW8 714 aaPredicted RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 EIF2B4Q9UI10 523 aaKnown RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 HCN2Q9UL51 889 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.5□□□□□ -1.53
SPG11-208ENST00000558155 RAD54BQ9Y620 910 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 A0A1B0GVT2 93 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 WASH3PC4AMC7 463 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 PRRT4C9JH25 899 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 NEDD8-MDP1E9PL57 170 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 PLK4O00444 970 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 KIAA0391O15091 583 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 TRIM24O15164 1050 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 COCHO43405 550 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 PCDHGA12O60330 932 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 CACNG3O60359 315 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 PRPF6O94906 941 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 CISD3P0C7P0 127 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 ACADMP11310 421 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 TYRP14679 529 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 PTPN1P18031 435 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 ITPKBP27987 946 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 HNF1BP35680 557 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 GRK6P43250 576 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 DGKGP49619 791 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 CSNK1EP49674 416 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 TUBP50607 506 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 AFF3P51826 1226 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 GOLGA8FQ08AF8 430 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 GOLGA8DPQ0D2H9 430 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 PTPRNQ16849 979 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 CCDC142Q17RM4 750 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 DUOXA2Q1HG44 320 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 KIF19Q2TAC6 998 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 INAVAQ3KP66 663 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 MDH1BQ5I0G3 518 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 SNX30Q5VWJ9 437 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 LARP1BQ659C4 914 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 MCTP1Q6DN14 999 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 DHRS13Q6UX07 377 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 TPGS1Q6ZTW0 290 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 LIMS2Q7Z4I7 341 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 TMPRSS6Q8IU80 811 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 OR6B3Q8NGW1 331 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 CXorf38Q8TB03 319 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 NOC3LQ8WTT2 800 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 RAD54LQ92698 747 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 PRCCQ92733 491 aaPredicted RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 FGF11Q92914 225 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 NXPE2Q96DL1 559 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 SAAL1Q96ER3 474 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 FCRL3Q96P31 734 aaPredicted RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 FIZ1Q96SL8 496 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 NRSN2Q9GZP1 204 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 ELOVL4Q9GZR5 314 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 PCED1AQ9H1Q7 454 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 SLC6A17Q9H1V8 727 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 MRPL44Q9H9J2 332 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 PDE11AQ9HCR9 933 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 CD248Q9HCU0 757 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 BLOC1S4Q9NUP1 217 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 INTS13Q9NVM9 706 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 MARK1Q9P0L2 795 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 USP36Q9P275 1121 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 SEL1LQ9UBV2 794 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 SIX4Q9UIU6 781 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 LSM7Q9UK45 103 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 ANKRD6Q9Y2G4 727 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 FNDC3AQ9Y2H6 1198 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 PCDHGA1Q9Y5H4 931 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 STON1Q9Y6Q2 735 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 FLNBO75369 2602 aaKnown RBP5.49□□□□□ -1.53
SPG11-208ENST00000558155 AKAP13Q12802 2813 aa5.49□□□□□ -1.53
SPG11-208ENST00000558155 ATP8B3O60423 1300 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 ASPMQ8IZT6 3477 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 GOLGA8IPA6NC78 632 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 ZNF233A6NK53 670 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 GOLGA8JA6NMD2 632 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 A8MXQ7 604 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 TIMM44O43615 452 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 TACC1O75410 805 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 LDOC1O95751 146 aaPredicted RBP5.48□□□□□ -1.53
SPG11-208ENST00000558155 IRF1P10914 325 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 GAP43P17677 238 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 ACTN2P35609 894 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 ATP5C1P36542 298 aaKnown RBP5.48□□□□□ -1.53
SPG11-208ENST00000558155 PLA2G4AP47712 749 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 TPMTP51580 245 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 WNT7BP56706 349 aa5.48□□□□□ -1.53
SPG11-208ENST00000558155 BNC1Q01954 994 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms