RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SLC10A2Q12908 348 aaPredicted RBP9.27□□□□□ -0.93
TDP1-210ENST00000554976 NCBP2-AS2Q69YL0 99 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 OVOS1Q6IE37 1185 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 UNC45BQ8IWX7 931 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 NTAN1Q96AB6 310 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 TMEM121Q9BTD3 319 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 RCOR3Q9P2K3 495 aaPredicted RBP9.27□□□□□ -0.93
TDP1-210ENST00000554976 NAALADL1Q9UQQ1 740 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 GOLGA8KD6RF30 607 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 SYN3O14994 580 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 RIPK2O43353 540 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 GAS8O95995 478 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 SULT1E1P49888 294 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 PPP1R7Q15435 360 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 ZCCHC9Q8N567 271 aaKnown RBP9.27□□□□□ -0.93
TDP1-210ENST00000554976 CCHCR1Q8TD31 782 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 HAUS1Q96CS2 278 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 SLC9A7Q96T83 725 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 WDR83Q9BRX9 315 aaKnown RBP9.27□□□□□ -0.93
TDP1-210ENST00000554976 MED10Q9BTT4 135 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 PHACTR1Q9C0D0 580 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 TMPRSS4Q9NRS4 437 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 DOCK4Q8N1I0 1966 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 SF3B1O75533 1304 aaKnown RBP eCLIP9.27□□□□□ -0.934e-7■■■■■ 133.7
TDP1-210ENST00000554976 ERICH4A6NGS2 130 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 DGKIO75912 1065 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 RDXP35241 583 aaKnown RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 CETN2P41208 172 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 PGFP49763 221 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 GYS2P54840 703 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 HNRNPH2P55795 449 aaKnown RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 DPYSQ14117 519 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 TRIP13Q15645 432 aaPredicted RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 CFAP58Q5T655 872 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 PYROXD2Q8N2H3 581 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 CCDC89Q8N998 374 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 NAT8LQ8N9F0 302 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 OR2W6PQ8NHA6 318 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 URGCPQ8TCY9 931 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 PRCCQ92733 491 aaPredicted RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 CCDC114Q96M63 670 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 CSPG4P5Q96PW8 444 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 TMEM175Q9BSA9 504 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 SEMA4AQ9H3S1 761 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 C10orf88Q9H8K7 445 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 NGRNQ9NPE2 291 aaKnown RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 PSD3Q9NYI0 1048 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 EURLQ9NYK6 297 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 CWC15Q9P013 229 aaKnown RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 AP4E1Q9UPM8 1137 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 FAM92AA1XBS5 289 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 BCLAF3A2AJT9 711 aaKnown RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 ZBED1O96006 694 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 USP17L7P0C7H9 530 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 ATF2P15336 505 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 AIF1P55008 147 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 P3H1Q32P28 736 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 IZUMO3Q5VZ72 239 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 METTL23Q86XA0 190 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 RFX6Q8HWS3 928 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 NPAS4Q8IUM7 802 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 TLCD1Q96CP7 247 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 PWWP2AQ96N64 755 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 CDC42EP4Q9H3Q1 356 aaKnown RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 DMAP1Q9NPF5 467 aaPredicted RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 ATP8A1Q9Y2Q0 1164 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 MFHAS1Q9Y4C4 1052 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 ANAPC1Q9H1A4 1944 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 SHOX2O60902 331 aaPredicted RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 BDNFP23560 247 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 CYP2F1P24903 491 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 RPL22P35268 128 aaKnown RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 MAGEA6P43360 314 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 SLC11A1P49279 550 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 DYNLT1P63172 113 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 SATB1Q01826 763 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 YWHAHQ04917 246 aaPredicted RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 SLMAPQ14BN4 828 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 TRIM60Q495X7 471 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 RSPO2Q6UXX9 243 aaPredicted RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 DIS3LQ8TF46 1054 aaKnown RBP9.26□□□□□ -0.93
TDP1-210ENST00000554976 CPT1BQ92523 772 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 SEPT8Q92599 483 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 DPF3Q92784 378 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 SCLYQ96I15 445 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 VN1R3Q9BXE9 311 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 CWH43Q9H720 699 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 ADAM21Q9UKJ8 722 aa9.26□□□□□ -0.93
TDP1-210ENST00000554976 DENND4CQ5VZ89 1909 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 E7ESA3 106 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 DCLK1O15075 740 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 PARNO95453 639 aaKnown RBP9.25□□□□□ -0.93
TDP1-210ENST00000554976 LTFP02788 710 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 CXCR3P49682 368 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 SKOR1P84550 965 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 MORF4L2Q15014 288 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 MAPRE1Q15691 268 aaKnown RBP9.25□□□□□ -0.93
TDP1-210ENST00000554976 TRMT10CQ7L0Y3 403 aaKnown RBP9.25□□□□□ -0.93
TDP1-210ENST00000554976 SCD5Q86SK9 330 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 TMEM173Q86WV6 379 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms