RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 EPS8L2Q9H6S3 715 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 TMX2Q9Y320 296 aa14.36□□□□□ -0.11
VTI1B-204ENST00000554659 C6orf222P0C671 652 aaPredicted RBP14.35□□□□□ -0.11
VTI1B-204ENST00000554659 MAPK1P28482 360 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 SLC16A1P53985 500 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 TRIM71Q2Q1W2 868 aaKnown RBP14.35□□□□□ -0.11
VTI1B-204ENST00000554659 TMC5Q6UXY8 1006 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 LRRC8DQ7L1W4 858 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 FGD2Q7Z6J4 655 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 ARHGEF19Q8IW93 802 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 MAML3Q96JK9 1138 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 ADAMTS13Q76LX8 1427 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 PECAM1P16284 738 aaPredicted RBP14.35□□□□□ -0.11
VTI1B-204ENST00000554659 SLC1A6P48664 564 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 TRIM25Q14258 630 aaKnown RBP14.35□□□□□ -0.11
VTI1B-204ENST00000554659 CENPLQ8N0S6 344 aaPredicted RBP14.35□□□□□ -0.11
VTI1B-204ENST00000554659 PRDM5Q9NQX1 630 aaPredicted RBP14.35□□□□□ -0.11
VTI1B-204ENST00000554659 PNMA8BQ9ULN7 279 aaPredicted RBP14.35□□□□□ -0.11
VTI1B-204ENST00000554659 SIK3Q9Y2K2 1263 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 RAD54BQ9Y620 910 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 STAG3L1P0CL83 205 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 PRKAA1Q13131 559 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 TTMPQ5BVD1 217 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 KHDRBS2Q5VWX1 349 aaKnown RBP14.35□□□□□ -0.11
VTI1B-204ENST00000554659 NUDT18Q6ZVK8 323 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 FUKQ8N0W3 1084 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 EMC1Q8N766 993 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 STK32AQ8WU08 396 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 SLC7A5P2Q9GIP4 190 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 VTI1BQ9UEU0 232 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 GGA2Q9UJY4 613 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 SAC3D1A6NKF1 404 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 ACO1P21399 889 aaKnown RBP14.35□□□□□ -0.11
VTI1B-204ENST00000554659 CYP2F1P24903 491 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 PLIN5Q00G26 463 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 NAIF1Q69YI7 327 aaPredicted RBP14.35□□□□□ -0.11
VTI1B-204ENST00000554659 COLGALT1Q8NBJ5 622 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 CASP10Q92851 521 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 TATDN2Q93075 761 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 MYLK2Q9H1R3 596 aa14.35□□□□□ -0.11
VTI1B-204ENST00000554659 UBDO15205 165 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 N4BP2L1Q5TBK1 243 aaPredicted RBP14.34□□□□□ -0.11
VTI1B-204ENST00000554659 GRTP1Q5TC63 336 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 FOXR1Q6PIV2 292 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 DEFB129Q9H1M3 183 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 BLOC1S4Q9NUP1 217 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 IQCA1LA6NCM1 817 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 ZBTB7AO95365 584 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 ZNF268Q14587 947 aaPredicted RBP14.34□□□□□ -0.11
VTI1B-204ENST00000554659 ZNF662Q6ZS27 426 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 CHMP1BQ7LBR1 199 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 MREGQ8N565 214 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 ZCCHC9Q8N567 271 aaKnown RBP14.34□□□□□ -0.11
VTI1B-204ENST00000554659 GPRC5AQ8NFJ5 357 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 GANQ9H2C0 597 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 IL17RBQ9NRM6 502 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 FRMPD4Q14CM0 1322 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 NR5A2O00482 541 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 SOX6P35712 828 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 GP5P40197 560 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 CASP7P55210 303 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 ILF2Q12905 390 aaKnown RBP14.34□□□□□ -0.11
VTI1B-204ENST00000554659 R3HDM1Q15032 1099 aaKnown RBP14.34□□□□□ -0.11
VTI1B-204ENST00000554659 HIST2H2ACQ16777 129 aaPredicted RBP14.34□□□□□ -0.11
VTI1B-204ENST00000554659 HIST2H2AA3Q6FI13 130 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 ZNF467Q7Z7K2 595 aaPredicted RBP14.34□□□□□ -0.11
VTI1B-204ENST00000554659 SPIRE2Q8WWL2 714 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 ZNF75CPQ92670 426 aaPredicted RBP14.34□□□□□ -0.11
VTI1B-204ENST00000554659 TRAPPC9Q96Q05 1148 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 SRPK1Q96SB4 655 aaKnown RBP14.34□□□□□ -0.11
VTI1B-204ENST00000554659 VANGL2Q9ULK5 521 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 DIP2CQ9Y2E4 1556 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 PRKCIP41743 596 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 RAP1GAPP47736 663 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.34□□□□□ -0.11
VTI1B-204ENST00000554659 NFIAQ12857 509 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 AMHR2Q16671 573 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 FAM180AQ6UWF9 173 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 LRRC74BQ6ZQY2 392 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 SPATA16Q9BXB7 569 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 CYP4F12Q9HCS2 524 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 PXMP2Q9NR77 195 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 DIP2BQ9P265 1576 aa14.34□□□□□ -0.11
VTI1B-204ENST00000554659 ADGRB1O14514 1584 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 STK25O00506 426 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 SMNDC1O75940 238 aaKnown RBP eCLIP14.33□□□□□ -0.11
VTI1B-204ENST00000554659 SLC26A2P50443 739 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 CDK16Q00536 496 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 BST2Q10589 180 aaKnown RBP14.33□□□□□ -0.11
VTI1B-204ENST00000554659 ATP6AP1LQ52LC2 224 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 TDRD10Q5VZ19 366 aaKnown RBP14.33□□□□□ -0.11
VTI1B-204ENST00000554659 IRGCQ6NXR0 463 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 DDX53Q86TM3 631 aaKnown RBP14.33□□□□□ -0.11
VTI1B-204ENST00000554659 WDR48Q8TAF3 677 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 ZNF606Q8WXB4 792 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 DNAJC18Q9H819 358 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 GPAMQ9HCL2 828 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 GGA3Q9NZ52 723 aa14.33□□□□□ -0.11
VTI1B-204ENST00000554659 C6orf203Q9P0P8 240 aaPredicted RBP14.33□□□□□ -0.11
VTI1B-204ENST00000554659 TECPR2O15040 1411 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms