RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 RNF38Q9H0F5 515 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.8□□□□□ -0.044e-29■■■■■ 248.4
SPTLC2-202ENST00000554365 SMPD4Q9NXE4 827 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 EHD2Q9NZN4 543 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 CPQQ9Y646 472 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 ANAPC1Q9H1A4 1944 aa14.8□□□□□ -0.04
SPTLC2-202ENST00000554365 ZNF840PA6NDX5 716 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 TRIM66O15016 1216 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 MAP3K13O43283 966 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 PHACTR2O75167 634 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 ALDH1A2O94788 518 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 STAU1O95793 577 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 GYPCP04921 128 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 PFKLP17858 780 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 SPINK2P20155 84 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 WARSP23381 471 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 TIE1P35590 1138 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 HELZP42694 1942 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 SLC6A11P48066 632 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 MRPS21P82921 87 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 CETN1Q12798 172 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 IFRD2Q12894 506 aaPredicted RBP14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 DHCR24Q15392 516 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 CRY1Q16526 586 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 UAP1L1Q3KQV9 507 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 FIGNQ5HY92 759 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 UNQ6494/PRO21346Q6UXR6 183 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 TMEM92Q6UXU6 159 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 LIMS2Q7Z4I7 341 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 SFTPA1Q8IWL2 248 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 ADGRG2Q8IZP9 1017 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 ALLCQ8N6M5 410 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 MYCBPAPQ8TBZ2 947 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 PIGKQ92643 395 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 TATDN2Q93075 761 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 CEP295NLQ96MC4 621 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 NAA15Q9BXJ9 866 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 SNX25Q9H3E2 840 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 VRTNQ9H8Y1 702 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 FAM207AQ9NSI2 230 aaPredicted RBP14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 FHOD1Q9Y613 1164 aa14.79□□□□□ -0.04
SPTLC2-202ENST00000554365 F8VP50 259 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 CDX4O14627 284 aaPredicted RBP14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 SLC9A3R1O14745 358 aaPredicted RBP14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 KLF8O95600 359 aaPredicted RBP14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 PPP3CCP48454 512 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 NOP14P78316 857 aaKnown RBP14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 IRX4P78413 519 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 SLC7A9P82251 487 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 LRMPQ12912 555 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 ARMCX6Q7L4S7 300 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 TXNDC5Q8NBS9 432 aaKnown RBP14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 SPC24Q8NBT2 197 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 OR6B3Q8NGW1 331 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 RLN3Q8WXF3 142 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 BAP1Q92560 729 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 KAT5Q92993 513 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 SPACA7Q96KW9 195 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 KREMEN1Q96MU8 473 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 PPP1R9BQ96SB3 815 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 PNKPQ96T60 521 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 MRPL45Q9BRJ2 306 aaKnown RBP14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 TTLL2Q9BWV7 592 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 ZDHHC4Q9NPG8 344 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 BCCIPQ9P287 314 aaKnown RBP eCLIP14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 CFAP97Q9P2B7 532 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 APEX2Q9UBZ4 518 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 CFAP47Q6ZTR5 3102 aa14.78□□□□□ -0.04
SPTLC2-202ENST00000554365 LAMA1P25391 3075 aa14.77□□□□□ -0.04
SPTLC2-202ENST00000554365 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 SGK1O00141 431 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 KAT7O95251 611 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 TOP3BO95985 862 aaKnown RBP14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 APODP05090 189 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 MBL2P11226 248 aaPredicted RBP14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 HNRNPLP14866 589 aaKnown RBP eCLIP14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 UCHL3P15374 230 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 ATICP31939 592 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 GNL1P36915 607 aaPredicted RBP14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 P2RY2P41231 377 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 CACNA2D1P54289 1103 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 KDSRQ06136 332 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 MESP2Q0VG99 397 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 TAF10Q12962 218 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 TRPC3Q13507 836 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 SGSM1Q2NKQ1 1148 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 EMC10Q5UCC4 262 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 LPCAT2Q7L5N7 544 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 C12orf40Q86WS4 652 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 TMEFF1Q8IYR6 380 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 PGBD3Q8N328 593 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 FRMD1Q8N878 549 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 IL17RCQ8NAC3 791 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 NEK11Q8NG66 645 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 OLIG1Q8TAK6 271 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 WHAMMQ8TF30 809 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 TAF4BQ92750 862 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 C8orf48Q96LL4 319 aa14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 PCMTD1Q96MG8 357 aaPredicted RBP14.77□□□□□ -0.05
SPTLC2-202ENST00000554365 NT5C1BQ96P26 610 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms