RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 TMEM175Q9BSA9 504 aa6.28□□□□□ -1.4
ATXN3-226ENST00000554350 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
ATXN3-226ENST00000554350 DNMT3BQ9UBC3 853 aaKnown RBP6.28□□□□□ -1.4
ATXN3-226ENST00000554350 FBXW11Q9UKB1 542 aa6.28□□□□□ -1.4
ATXN3-226ENST00000554350 NUDT5Q9UKK9 219 aa6.28□□□□□ -1.4
ATXN3-226ENST00000554350 APOBEC2Q9Y235 224 aaKnown RBP6.28□□□□□ -1.4
ATXN3-226ENST00000554350 NOTCH2Q04721 2471 aa6.28□□□□□ -1.4
ATXN3-226ENST00000554350 SALL3Q9BXA9 1300 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 WDR81Q562E7 1941 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 PLXNB3Q9ULL4 1909 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 TRABD2BA6NFA1 517 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 SPECC1L-ADORA2AF8WAN1 911 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 K7ESM1 405 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 ZBTB5O15062 677 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 ITGB3P05106 788 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 RHOP08100 348 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 FCARP24071 287 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 TMOD1P28289 359 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 VIPR2P41587 438 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 CCR10P46092 362 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 MCM2P49736 904 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 DGKEP52429 567 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 ANAPC15P60006 121 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 ACTR2P61160 394 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 TRAF1Q13077 416 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 HNRNPDQ14103 355 aaKnown RBP6.27□□□□□ -1.41
ATXN3-226ENST00000554350 MAPK6Q16659 721 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 SLC5A9Q2M3M2 681 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 ZXDCQ2QGD7 858 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-226ENST00000554350 USP41Q3LFD5 358 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 ZNF484Q5JVG2 852 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 FAM160B1Q5W0V3 765 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 PRSS55Q6UWB4 352 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-226ENST00000554350 VITQ6UXI7 678 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 PLPPR4Q7Z2D5 763 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 CEP57Q86XR8 500 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 MARCH9Q86YJ5 346 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 PIBF1Q8WXW3 757 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 ZBTB8AQ96BR9 441 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 MSANTD3Q96H12 275 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 SPATA32Q96LK8 384 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 SDF4Q9BRK5 362 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 C8orf33Q9H7E9 229 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-226ENST00000554350 GPRC5CQ9NQ84 441 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 FSCN3Q9NQT6 498 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 CHST12Q9NRB3 414 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 POLR3BQ9NW08 1133 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-226ENST00000554350 MARCH5Q9NX47 278 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 NTMQ9P121 344 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 FNIP2Q9P278 1114 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 ANKMY1Q9P2S6 941 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 PIN4Q9Y237 131 aaKnown RBP6.27□□□□□ -1.41
ATXN3-226ENST00000554350 EMC9Q9Y3B6 208 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 COL6A6A6NMZ7 2263 aa6.27□□□□□ -1.41
ATXN3-226ENST00000554350 FRMPD4Q14CM0 1322 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 EML5Q05BV3 1969 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 THADAQ6YHU6 1953 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 F8W810 466 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 RRP8O43159 456 aaKnown RBP6.26□□□□□ -1.41
ATXN3-226ENST00000554350 NPHS1O60500 1241 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 ATG13O75143 517 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 C22orf31O95567 290 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 C1RP00736 705 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 FUCA1P04066 466 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 GP1BBP13224 206 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 PLS3P13797 630 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 DARSP14868 501 aaKnown RBP6.26□□□□□ -1.41
ATXN3-226ENST00000554350 SDSP20132 328 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 HOXA9P31269 272 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 EIF2S3P41091 472 aaKnown RBP6.26□□□□□ -1.41
ATXN3-226ENST00000554350 SLC26A2P50443 739 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 PDE1AP54750 535 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 RIPPLY3P57055 190 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 HAND2P61296 217 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 INF2Q27J81 1249 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 L1TD1Q5T7N2 865 aaKnown RBP6.26□□□□□ -1.41
ATXN3-226ENST00000554350 PMS2CLQ68D20 193 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 EFCAB12Q6NXP0 572 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 TTC30AQ86WT1 665 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 SYNPOQ8N3V7 929 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 LRRC71Q8N4P6 559 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 FAM26EQ8N5C1 309 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 CAMKK1Q8N5S9 505 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 ADAMTS17Q8TE56 1095 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 DEPDC1BQ8WUY9 529 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 COLEC11Q9BWP8 271 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 TPSD1Q9BZJ3 242 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 LRRCC1Q9C099 1032 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 SLITRK6Q9H5Y7 841 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 RSAD1Q9HA92 442 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 TRPV5Q9NQA5 729 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 DKK4Q9UBT3 224 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 IL17BQ9UHF5 180 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 EVLQ9UI08 416 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-226ENST00000554350 COL1A2P08123 1366 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 ABCA7Q8IZY2 2146 aa6.26□□□□□ -1.41
ATXN3-226ENST00000554350 PDCD11Q14690 1871 aaKnown RBP6.26□□□□□ -1.41
ATXN3-226ENST00000554350 ATXN2Q99700 1313 aaKnown RBP6.25□□□□□ -1.41
ATXN3-226ENST00000554350 GOLGA4Q13439 2230 aaKnown RBP6.25□□□□□ -1.41
ATXN3-226ENST00000554350 TRBV23OR9-2A0A075B6M9 112 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms