RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 CCNJLQ8IV13 435 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 MAP7D3Q8IWC1 876 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 CPXCR1Q8N123 301 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 VPS52Q8N1B4 723 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ARFGAP1Q8N6T3 406 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 CHST13Q8NET6 341 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TTC8Q8TAM2 541 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TFAP2BQ92481 460 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 NCSTNQ92542 709 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 GATA6Q92908 595 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 PTPRN2Q92932 1015 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 HAUS1Q96CS2 278 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 FAF2Q96CS3 445 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SERAC1Q96JX3 654 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SRPK1Q96SB4 655 aaKnown RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TSC22D3Q99576 134 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 FAM118BQ9BPY3 351 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SH2D3AQ9BRG2 576 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ZNF670Q9BS34 389 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 CNPY3Q9BT09 278 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TARS2Q9BW92 718 aaKnown RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 NFKBIZQ9BYH8 718 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 GCOM2Q9BZD3 368 aaPredicted RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 IQCGQ9H095 443 aaKnown RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KLC2Q9H0B6 622 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SDCBP2Q9H190 292 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 VCX3BQ9H321 246 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 EPB41L1Q9H4G0 881 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ACAD9Q9H845 621 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 XAB2Q9HCS7 855 aaKnown RBP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ZNF302Q9NR11 478 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ARL8BQ9NVJ2 186 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KLHL11Q9NVR0 708 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ASNSD1Q9NWL6 643 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC17A7Q9P2U7 560 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 FBXO40Q9UH90 709 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TAGLN3Q9UI15 199 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 ZNF112Q9UJU3 913 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KIAA1257Q9ULG3 409 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 TBC1D30Q9Y2I9 924 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 PLLPQ9Y342 182 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC4A7Q9Y6M7 1214 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 NUMBLQ9Y6R0 609 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 KIAA1217Q5T5P2 1943 aa5.46□□□□□ -1.54
TMEM55B-204ENST00000553602 SF3B1O75533 1304 aaKnown RBP eCLIP5.46□□□□□ -1.544e-7■■■■■ 133.7
TMEM55B-204ENST00000553602 IGKV6-21A0A0C4DH24 114 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 A0A0G2JND7 137 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 SPECC1L-ADORA2AF8WAN1 911 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 PDLIM1O00151 329 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 WNT10BO00744 389 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 CAPN9O14815 690 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 MDM4O15151 490 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC22A2O15244 555 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 AP1G1O43747 822 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 PEX1O43933 1283 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 CCNT2O60583 730 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 TBX10O75333 385 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 CIB2O75838 187 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ALDH1A2O94788 518 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 SNUPNO95149 360 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 TRUB2O95900 331 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 TNNC2P02585 160 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 APOEP02649 317 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 TGFB3P10600 412 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 MYL2P10916 166 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 P4HA1P13674 534 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ETS1P14921 441 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ZFXP17010 805 aaPredicted RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 DESP17661 470 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 IBSPP21815 317 aaPredicted RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 PRDX6P30041 224 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 CRHR1P34998 444 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 RFC1P35251 1148 aaPredicted RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 PGM1P36871 562 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ELK3P41970 407 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC26A2P50443 739 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 PAPOLAP51003 745 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 PTPN5P54829 565 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 SOX10P56693 466 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 BACE1P56817 501 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 AP2B1P63010 937 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 IRX4P78413 519 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 BASP1P80723 227 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 DSG1Q02413 1049 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ADCY1Q08828 1119 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 FAAP100Q0VG06 881 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 TRPC3Q13507 836 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 FRG1Q14331 258 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 STXBP2Q15833 593 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 INSCQ1MX18 579 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 TBC1D10BQ4KMP7 808 aaPredicted RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 CRTC2Q53ET0 693 aaPredicted RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 BOLA3Q53S33 107 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ZBTB41Q5SVQ8 909 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 LMBRD2Q68DH5 695 aaPredicted RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 CWF19L1Q69YN2 538 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 TRIM68Q6AZZ1 485 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms