RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 TBR1Q16650 682 aa12□□□□□ -0.49
GPN3-208ENST00000550974 IGF2-ASQ6U949 168 aa12□□□□□ -0.49
GPN3-208ENST00000550974 RASEFQ8IZ41 740 aa12□□□□□ -0.49
GPN3-208ENST00000550974 SPATA20Q8TB22 786 aa12□□□□□ -0.49
GPN3-208ENST00000550974 TSPAN18Q96SJ8 248 aa12□□□□□ -0.49
GPN3-208ENST00000550974 PKMYT1Q99640 499 aa12□□□□□ -0.49
GPN3-208ENST00000550974 OSBPL2Q9H1P3 480 aa12□□□□□ -0.49
GPN3-208ENST00000550974 LHX5Q9H2C1 402 aa12□□□□□ -0.49
GPN3-208ENST00000550974 BHMT2Q9H2M3 363 aa12□□□□□ -0.49
GPN3-208ENST00000550974 AASDHPPTQ9NRN7 309 aa12□□□□□ -0.49
GPN3-208ENST00000550974 GEMIN8Q9NWZ8 242 aaKnown RBP12□□□□□ -0.49
GPN3-208ENST00000550974 KNL1Q8NG31 2342 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 A0A1W2PNU3 283 aaPredicted RBP11.99□□□□□ -0.49
GPN3-208ENST00000550974 A1L4Q6 167 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 SIGLEC6O43699 453 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 AGFG2O95081 481 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 CISD3P0C7P0 127 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 CASRP41180 1078 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 CDH8P55286 799 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 TAF10Q12962 218 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 TMEM132DQ14C87 1099 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 SV2CQ496J9 727 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 ZPBP2Q6X784 338 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 KANSL1Q7Z3B3 1105 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 PDCL2Q8N4E4 241 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 BHMTQ93088 406 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 WBP2Q969T9 261 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 FUBP3Q96I24 572 aaKnown RBP eCLIP11.99□□□□□ -0.49
GPN3-208ENST00000550974 SPATA17Q96L03 361 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 CCSER1Q9C0I3 900 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 GZF1Q9H116 711 aaPredicted RBP11.99□□□□□ -0.49
GPN3-208ENST00000550974 ABCG4Q9H172 646 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 EHD2Q9NZN4 543 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 THAP10Q9P2Z0 257 aaPredicted RBP11.99□□□□□ -0.49
GPN3-208ENST00000550974 PTPRJQ12913 1337 aa11.99□□□□□ -0.49
GPN3-208ENST00000550974 CACNA1DQ01668 2161 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 FAM47DPA6NHR8 397 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 CDRT15L2A8MXV6 281 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 TRIM38O00635 465 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 COCHO43405 550 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 HCRTO43612 131 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 NEMFO60524 1076 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 HIP1RO75146 1068 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 IGHV4-34P06331 123 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 EPHX1P07099 455 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 HMGB1P09429 215 aaKnown RBP11.98□□□□□ -0.49
GPN3-208ENST00000550974 ANXA13P27216 316 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 COL8A1P27658 744 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 DUSP3P51452 185 aaPredicted RBP11.98□□□□□ -0.49
GPN3-208ENST00000550974 IFRD2Q12894 506 aaPredicted RBP11.98□□□□□ -0.49
GPN3-208ENST00000550974 CLCA4Q14CN2 919 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 KIAA0895LQ68EN5 471 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 TICAM1Q8IUC6 712 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 DAW1Q8N136 415 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 BICD1Q96G01 975 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 PRR11Q96HE9 360 aaPredicted RBP11.98□□□□□ -0.49
GPN3-208ENST00000550974 TTLL2Q9BWV7 592 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 WDR35Q9P2L0 1181 aa11.98□□□□□ -0.49
GPN3-208ENST00000550974 MAGEC2Q9UBF1 373 aaPredicted RBP11.98□□□□□ -0.49
GPN3-208ENST00000550974 A0A1W2PPC4 97 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 PMS2P1A4D2B8 440 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 SFI1A8K8P3 1242 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 SDC3O75056 442 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 ADRB2P07550 413 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 BDNFP23560 247 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 PRKCHP24723 683 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 RPA1P27694 616 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 CD38P28907 300 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 PDIA3P30101 505 aaKnown RBP11.97□□□□□ -0.49
GPN3-208ENST00000550974 MAGEA11P43364 429 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 CYP4F2P78329 520 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 ENPP2Q13822 863 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 KYAT1Q16773 422 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 ISXQ2M1V0 245 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 TMC6Q7Z403 805 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 CD302Q8IX05 232 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 FAM177A1Q8N128 213 aaPredicted RBP11.97□□□□□ -0.49
GPN3-208ENST00000550974 ARL14Q8N4G2 192 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 ATXN7L3BQ96GX2 97 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 ESYT1Q9BSJ8 1104 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 GJB4Q9NTQ9 266 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 PPP4R2Q9NY27 417 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 DPP3Q9NY33 737 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 PLK2Q9NYY3 685 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 ICE1Q9Y2F5 2266 aa11.97□□□□□ -0.49
GPN3-208ENST00000550974 A0A1B0GVM2 712 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 VPS37CA5D8V6 355 aaPredicted RBP11.96□□□□□ -0.49
GPN3-208ENST00000550974 WNT9AO14904 365 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 NPC1O15118 1278 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 ATP2C2O75185 946 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 TNFSF15O95150 251 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 ACO1P21399 889 aaKnown RBP11.96□□□□□ -0.49
GPN3-208ENST00000550974 RXRGP48443 463 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 KRT32Q14532 448 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 ZNF234Q14588 700 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 TGIF1Q15583 401 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 GEN1Q17RS7 908 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 HS1BP3Q53T59 392 aa11.96□□□□□ -0.49
GPN3-208ENST00000550974 TDRD10Q5VZ19 366 aaKnown RBP11.96□□□□□ -0.49
GPN3-208ENST00000550974 VSTM1Q6UX27 236 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms