RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 IQCDQ96DY2 449 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 HOOK2Q96ED9 719 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 SH3GL3Q99963 347 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 FSD1Q9BTV5 496 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 TRIM6Q9C030 488 aaPredicted RBP3.6□□□□□ -1.83
CCNT1-203ENST00000550457 HSD3B7Q9H2F3 369 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 ATP6V0A4Q9HBG4 840 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 ZNHIT6Q9NWK9 470 aaKnown RBP3.6□□□□□ -1.83
CCNT1-203ENST00000550457 HPSEQ9Y251 543 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 PCDHGA2Q9Y5H1 932 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 A2ML1A8K2U0 1454 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 CACNA1FO60840 1977 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 ABCC6O95255 1503 aa3.6□□□□□ -1.83
CCNT1-203ENST00000550457 PREX1Q8TCU6 1659 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 N4BP2Q86UW6 1770 aaPredicted RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 A0A1B0GVL5 298 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 LRRIQ3A6PVS8 624 aaPredicted RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 NDUFAB1O14561 156 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 LIN7AO14910 233 aaPredicted RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 MPPED1O15442 326 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 JAK2O60674 1132 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 N4BP1O75113 896 aaKnown RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 RASSF9O75901 435 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 ATP1A3P13637 1013 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 DDCP20711 480 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 PBX1P40424 430 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 PRPHP41219 470 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 GRIA3P42263 894 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 GPR3P46089 330 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 CCT5P48643 541 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 MTNR1BP49286 362 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 PLCD1P51178 756 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 RWDD2BP57060 319 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 KRT83P78385 493 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 RRS1Q15050 365 aaKnown RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 RBBP5Q15291 538 aaKnown RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 SNCBQ16143 134 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 KIAA0753Q2KHM9 967 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 CCDC40Q4G0X9 1142 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 CCDC38Q502W7 563 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 HSP90AB2PQ58FF8 381 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 ZNF569Q5MCW4 686 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 DACT2Q5SW24 774 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 CEP85LQ5SZL2 805 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 BEND3Q5T5X7 828 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 SPATA1Q5VX52 437 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 RESP18Q5W5W9 173 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 PPP4R3AQ6IN85 833 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 CPLX2Q6PUV4 134 aaKnown RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 CRELD2Q6UXH1 353 aaPredicted RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 CCNI2Q6ZMN8 369 aaPredicted RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 DDX46Q7L014 1031 aaKnown RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 PTF1AQ7RTS3 328 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 TRAPPC11Q7Z392 1133 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 AACSQ86V21 672 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 IQCA1Q86XH1 822 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 CD302Q8IX05 232 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 MMGT1Q8N4V1 131 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 ARFGAP2Q8N6H7 521 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 PDILTQ8N807 584 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 DCBLD1Q8N8Z6 715 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 KAT2BQ92831 832 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 CCDC47Q96A33 483 aaKnown RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 FBXL20Q96IG2 436 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 RSRC1Q96IZ7 334 aaKnown RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 C8orf76Q96K31 380 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 RUFY1Q96T51 708 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 JPH2Q9BR39 696 aaPredicted RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 PYM1Q9BRP8 204 aaKnown RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 TEX13AQ9BXU3 409 aaPredicted RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 TSGA10Q9BZW7 698 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 HAUS4Q9H6D7 363 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 VCPKMTQ9H867 229 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 KAT14Q9H8E8 782 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 HELLSQ9NRZ9 838 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 KLC4Q9NSK0 619 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 SPATS2LQ9NUQ6 558 aaKnown RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 STK26Q9P289 416 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 RNF14Q9UBS8 474 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 ODF2LQ9ULJ1 636 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 APOBEC2Q9Y235 224 aaKnown RBP3.59□□□□□ -1.83
CCNT1-203ENST00000550457 SAR1BQ9Y6B6 198 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 UTYO14607 1347 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 NEDD4P46934 1319 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 SH3TC1Q8TE82 1336 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 CARMIL3Q8ND23 1372 aa3.59□□□□□ -1.83
CCNT1-203ENST00000550457 SETD1AO15047 1707 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 A0A0D9SFI3 127 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 LINC00473A8K010 186 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 HMGB1P1B2RPK0 211 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 VWC2LB2RUY7 222 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 KRT86O43790 486 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 HSF2BPO75031 334 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 RTN2O75298 545 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 LUC7L3O95232 432 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 IPO7O95373 1038 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 CTDNEP1O95476 244 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 DDX58O95786 925 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 BMP15O95972 392 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 FAM107AO95990 144 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms