RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	GOLGA1	Q92805	767 aa		12.52	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	LSM14B	Q9BX40	385 aa	Known RBP	12.52	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	VPS16	Q9H269	839 aa		12.52	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PRMT8	Q9NR22	394 aa	Predicted RBP	12.52	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	RASAL2	Q9UJF2	1139 aa		12.52	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	AJAP1	Q9UKB5	411 aa	Predicted RBP	12.52	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	MUC6	Q6W4X9	2439 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	DENND4C	Q5VZ89	1909 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	SART1	O43290	800 aa	Known RBP	12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	GREM1	O60565	184 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	GABBR2	O75899	941 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	STC2	O76061	302 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	EGF	P01133	1207 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	UCHL3	P15374	230 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	OPRD1	P41143	372 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	EIF2D	P41214	584 aa	Known RBP	12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	NBL1	P41271	181 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ACADSB	P45954	432 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	RPL34	P49207	117 aa	Known RBP	12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	COPB1	P53618	953 aa	Known RBP	12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	UBASH3A	P57075	661 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	CSTF1	Q05048	431 aa	Known RBP	12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	RAPGEF1	Q13905	1077 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	GAS6	Q14393	721 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	FBXO43	Q4G163	708 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	KLHDC7A	Q5VTJ3	777 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	BSPRY	Q5W0U4	402 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	DPY19L2P1	Q6NXN4	242 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	DENND1B	Q6P3S1	775 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ZC3H14	Q6PJT7	736 aa	Known RBP	12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	FAM71A	Q8IYT1	594 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	NDRG1	Q92597	394 aa	Known RBP	12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ANP32B	Q92688	251 aa	Known RBP	12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	WBP2	Q969T9	261 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	FBRSL1	Q9HCM7	1045 aa	Known RBP	12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ACP6	Q9NPH0	428 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PLCB1	Q9NQ66	1216 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	SPHK2	Q9NRA0	654 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ST7	Q9NRC1	585 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ABCC13	Q9NSE7	274 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	MARCH2	Q9P0N8	246 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	DAAM1	Q9Y4D1	1078 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	FHOD1	Q9Y613	1164 aa		12.51	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	LGALS16	A8MUM7	142 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PROB1	E7EW31	1015 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	FOXN3	O00409	490 aa	Predicted RBP	12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PIK3R2	O00459	728 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	HOXC11	O43248	304 aa	Predicted RBP	12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	LTF	P02788	710 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	CXCL12	P48061	93 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	BPIFB4	P59827	614 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	FANCC	Q00597	558 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	GAD2	Q05329	585 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	DRAP1	Q14919	205 aa	Predicted RBP	12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	GAB4	Q2WGN9	574 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	LY6G5C	Q5SRR4	150 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	SARM1	Q6SZW1	724 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188		Q6ZNB5	142 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	GAS2L3	Q86XJ1	694 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	CCDC26	Q8TAB7	109 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	EDEM1	Q92611	657 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PLD4	Q96BZ4	506 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	IQCD	Q96DY2	449 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PHOX2B	Q99453	314 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	NAA15	Q9BXJ9	866 aa	Known RBP	12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	SLC4A5	Q9BY07	1137 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	DCLK3	Q9C098	648 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	MIS12	Q9H081	205 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	RBSN	Q9H1K0	784 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	HSD3B7	Q9H2F3	369 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PCDHGC3	Q9UN70	934 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ZNF510	Q9Y2H8	683 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ANAPC1	Q9H1A4	1944 aa		12.5	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	HELZ	P42694	1942 aa	Known RBP	12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188		A0A1B0GTH6	734 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	SLC12A8	A0AV02	714 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ATG13	O75143	517 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	RNF40	O75150	1001 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PAPSS2	O95340	614 aa	Predicted RBP	12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	HMBS	P08397	361 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PNMA6A	P0CW24	399 aa	Predicted RBP	12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ATP1A3	P13637	1013 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	CORO1A	P31146	461 aa	Known RBP	12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	CLCN1	P35523	988 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	KRT9	P35527	623 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	SATB1	Q01826	763 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	UBXN1	Q04323	297 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PDCL	Q13371	301 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	ANO4	Q32M45	955 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	MSANTD2	Q6P1R3	559 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	SLC47A2	Q86VL8	602 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	FMNL3	Q8IVF7	1028 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	SCUBE3	Q8IX30	993 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	CLEC4C	Q8WTT0	213 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	NOX5	Q96PH1	765 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	PNKP	Q96T60	521 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	TRIM62	Q9BVG3	475 aa		12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	FAM126A	Q9BYI3	521 aa	Predicted RBP	12.49	□□□□□ -0.41
ARFGAP1-223	ENST00000550188	STK33	Q9BYT3	514 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms