RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 DENND1AQ8TEH3 1009 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 ZNF473Q8WTR7 871 aaKnown RBP10.38□□□□□ -0.75
RAB5B-206ENST00000549505 HAUS1Q96CS2 278 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 CSPG4P5Q96PW8 444 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 CCT8L2Q96SF2 557 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 SMOQ99835 787 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 POPDC2Q9HBU9 364 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 RABGEF1Q9UJ41 708 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 PPP1R12AO14974 1030 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-206ENST00000549505 OAS1P00973 400 aaKnown RBP10.38□□□□□ -0.75
RAB5B-206ENST00000549505 FAM200BP0CF97 657 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 CHRM1P11229 460 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-206ENST00000549505 ODC1P11926 461 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 ETS1P14921 441 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 HOXD10P28358 340 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 CCND3P30281 292 aaPredicted RBP10.38□□□□□ -0.75
RAB5B-206ENST00000549505 RGS7P49802 495 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 SP3Q02447 781 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 SEMA5AQ13591 1074 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 MAPRE1Q15691 268 aaKnown RBP10.38□□□□□ -0.75
RAB5B-206ENST00000549505 HIF1AQ16665 826 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 CA9Q16790 459 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 NCBP2-AS2Q69YL0 99 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 TAX1BP1Q86VP1 789 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 C3orf58Q8NDZ4 430 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 SYT15Q9BQS2 421 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 MAK16Q9BXY0 300 aaKnown RBP10.38□□□□□ -0.75
RAB5B-206ENST00000549505 GOLGA2P5Q9HBQ8 144 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 WDR6Q9NNW5 1121 aaKnown RBP10.38□□□□□ -0.75
RAB5B-206ENST00000549505 IL37Q9NZH6 218 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 PCDHB8Q9UN66 801 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 PHF24Q9UPV7 400 aa10.38□□□□□ -0.75
RAB5B-206ENST00000549505 SGK1O00141 431 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 TRDMT1O14717 391 aaKnown RBP10.37□□□□□ -0.75
RAB5B-206ENST00000549505 PGK1P00558 417 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 CYP2F1P24903 491 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 HOXC13P31276 330 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 CYP2C18P33260 490 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 MLH1P40692 756 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 RNASELQ05823 741 aaKnown RBP10.37□□□□□ -0.75
RAB5B-206ENST00000549505 MMRN1Q13201 1228 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 CCDC38Q502W7 563 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 LHX8Q68G74 356 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 TRABD2AQ86V40 505 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 CRIPAKQ8N1N5 446 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 BCAS4Q8TDM0 211 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 RSAD2Q8WXG1 361 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 HSPH1Q92598 858 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 SMARCD1Q96GM5 515 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 RNF186Q9NXI6 227 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 DDX43Q9NXZ2 648 aaKnown RBP10.37□□□□□ -0.75
RAB5B-206ENST00000549505 PCSK1NQ9UHG2 260 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 ZNF180Q9UJW8 692 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 AP4E1Q9UPM8 1137 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 NAALADL1Q9UQQ1 740 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 TANC1Q9C0D5 1861 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 DCLK1O15075 740 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 HCRTO43612 131 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 TMEM63AO94886 807 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 F9P00740 461 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 CDK7P50613 346 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 CLCNKBP51801 687 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 ACLYP53396 1101 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 TRIM32Q13049 653 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 ITGA7Q13683 1181 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 TRIP13Q15645 432 aaPredicted RBP10.37□□□□□ -0.75
RAB5B-206ENST00000549505 DNAJC21Q5F1R6 531 aaKnown RBP10.37□□□□□ -0.75
RAB5B-206ENST00000549505 ATP11CQ8NB49 1132 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 CLEC4CQ8WTT0 213 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 FATE1Q969F0 183 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 ACSF2Q96CM8 615 aaPredicted RBP10.37□□□□□ -0.75
RAB5B-206ENST00000549505 ZFP42Q96MM3 310 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 GAD1Q99259 594 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 MKS1Q9NXB0 559 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 STAP1Q9ULZ2 295 aa10.37□□□□□ -0.75
RAB5B-206ENST00000549505 TFE3P19532 575 aaPredicted RBP10.36□□□□□ -0.75
RAB5B-206ENST00000549505 PRKCHP24723 683 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 CXCR3P49682 368 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 KRT81Q14533 505 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 TIGD5Q53EQ6 642 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 FNBP1LQ5T0N5 605 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 ANKRD22Q5VYY1 191 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 STEAP4Q687X5 459 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 RNF180Q86T96 592 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 LPIN3Q9BQK8 851 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 RNF19AQ9NV58 838 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 COMMD8Q9NX08 183 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 FNIP2Q9P278 1114 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 FBXW11Q9UKB1 542 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 MEIS3P2A8K0S8 358 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 BEST1O76090 585 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 OAZ2O95190 189 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 EFEMP2O95967 443 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 PDGFRBP09619 1106 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 PRKAR2AP13861 404 aaKnown RBP10.36□□□□□ -0.75
RAB5B-206ENST00000549505 CHN1P15882 459 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 PHBP35232 272 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 GJC1P36383 396 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 ATP1A2P50993 1020 aa10.36□□□□□ -0.75
RAB5B-206ENST00000549505 BCAR1P56945 870 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms