RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SNX21Q969T3 373 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 ZNF396Q96N95 335 aaPredicted RBP12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 MIR1-1HGQ9H1L0 117 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 CUEDC2Q9H467 287 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 NMUR1Q9HB89 426 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 IL37Q9NZH6 218 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 LSM7Q9UK45 103 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 STARD13Q9Y3M8 1113 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 FAM208BQ5VWN6 2430 aa12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 GOLGA4Q13439 2230 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-205ENST00000548277 ASPMQ8IZT6 3477 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 A0A1W2PQH9 124 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 TAF4O00268 1085 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 CYP26A1O43174 497 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 GREM1O60565 184 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 PPP6R2O75170 966 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 ZNF217O75362 1048 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 CISD3P0C7P0 127 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 RARGP13631 454 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 TUBP50607 506 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 SNRPFP62306 86 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 TRIP6Q15654 476 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 C10orf120Q5SQS8 335 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 PEAR1Q5VY43 1037 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 CACUL1Q86Y37 369 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 MRGPRX1Q96LB2 322 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 FBXO44Q9H4M3 255 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 COMMD8Q9NX08 183 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 WDR35Q9P2L0 1181 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 KNL1Q8NG31 2342 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 UBE4BO95155 1302 aa12.61□□□□□ -0.39
TRAFD1-205ENST00000548277 TP53BP1Q12888 1972 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 A0A1W2PQD8 194 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 MEI4A8MW99 385 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 CACNG3O60359 315 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 FAM200BP0CF97 657 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 EHHADHQ08426 723 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 GOLGA8FQ08AF8 430 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 GOLGA8DPQ0D2H9 430 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 BMT2Q1RMZ1 405 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 SGSM1Q2NKQ1 1148 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 SYCP2LQ5T4T6 812 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 CEP135Q66GS9 1140 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 CRYBG2Q8N1P7 616 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 CYFIP2Q96F07 1278 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 ZNF419Q96HQ0 510 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 TWNKQ96RR1 684 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 GPR174Q9BXC1 333 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 MMRN2Q9H8L6 949 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 VRTNQ9H8Y1 702 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 CD248Q9HCU0 757 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 SERTAD1Q9UHV2 236 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 NAGPAQ9UK23 515 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 STON1Q9Y6Q2 735 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 IGF2RP11717 2491 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 SHROOM3Q8TF72 1996 aa12.6□□□□□ -0.39
TRAFD1-205ENST00000548277 CHD6Q8TD26 2715 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 FAM92AA1XBS5 289 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 GOLGA8CPA6NN73 597 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 UPK3BL1B0FP48 263 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 UPK3BL2E5RIL1 263 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 HSP90AA1P07900 732 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 P4HA1P13674 534 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 GNSP15586 552 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 CD58P19256 250 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 HOXD12P35452 270 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 PIK3CAP42336 1068 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 PLA2G4AP47712 749 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 SCAPQ12770 1279 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 STK4Q13043 487 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 CNNM4Q6P4Q7 775 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 CLEC20AQ6ZU45 233 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 SV2AQ7L0J3 742 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 RABEPKQ7Z6M1 372 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 HSCBQ8IWL3 235 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 C12orf56Q8IXR9 622 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 SETD7Q8WTS6 366 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 P2RY11Q96G91 374 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 TOE1Q96GM8 510 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 GABRG3Q99928 467 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 PRDM16Q9HAZ2 1276 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 IL21RQ9HBE5 538 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 CSNK1G1Q9HCP0 422 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 FAM13BQ9NYF5 915 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 CGNQ9P2M7 1197 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 RASAL2Q9UJF2 1139 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 DNMT3LQ9UJW3 386 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 PCDHA7Q9UN72 937 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 SCML2Q9UQR0 700 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 CKAP5Q14008 2032 aa12.59□□□□□ -0.39
TRAFD1-205ENST00000548277 CABIN1Q9Y6J0 2220 aa12.58□□□□□ -0.39
TRAFD1-205ENST00000548277 AKAP13Q12802 2813 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 PVALEFA0A1B0GWK0 134 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 KCNJ18B7U540 433 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 HHLA1C9JL84 531 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 H0Y626 953 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 STC2O76061 302 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 TRIM16O95361 564 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 HLA-DRAP01903 254 aa12.58□□□□□ -0.4
TRAFD1-205ENST00000548277 FTH1P19P0C7X4 201 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms