RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 CAPN11Q9UMQ6 739 aa2.77□□□□□ -1.97
CEP290-204ENST00000547926 SLC27A6Q9Y2P4 619 aa2.77□□□□□ -1.97
CEP290-204ENST00000547926 H7C1Q1 480 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 MYCLP12524 364 aaPredicted RBP2.76□□□□□ -1.97
CEP290-204ENST00000547926 TRIM27P14373 513 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 COPB1P53618 953 aaKnown RBP2.76□□□□□ -1.97
CEP290-204ENST00000547926 MTHFD1LQ6UB35 978 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 CLEC9AQ6UXN8 241 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 TMPRSS12Q86WS5 348 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 SFTPA1Q8IWL2 248 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 CCAR1Q8IX12 1150 aaKnown RBP2.76□□□□□ -1.97
CEP290-204ENST00000547926 ATP11CQ8NB49 1132 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 PJA1Q8NG27 643 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 SMCR8Q8TEV9 937 aaPredicted RBP2.76□□□□□ -1.97
CEP290-204ENST00000547926 C5orf34Q96MH7 638 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 ASB2Q96Q27 587 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 CTAGE1Q96RT6 745 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 SELENOOQ9BVL4 669 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 PRSS22Q9GZN4 317 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 PDGFCQ9NRA1 345 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 MGAT4CQ9UBM8 478 aa2.76□□□□□ -1.97
CEP290-204ENST00000547926 KIF3BO15066 747 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 ADAMTS3O15072 1205 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 CA12O43570 354 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 INMTO95050 263 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 CYP2A6P11509 494 aaPredicted RBP2.75□□□□□ -1.97
CEP290-204ENST00000547926 APEHP13798 732 aaKnown RBP2.75□□□□□ -1.97
CEP290-204ENST00000547926 FGFR2P21802 821 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 ATICP31939 592 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 HTR7P34969 479 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 MMP13P45452 471 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 STT3AP46977 705 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 HTR6P50406 440 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 COPAP53621 1224 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 LAMB3Q13751 1172 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 GRHL2Q6ISB3 625 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 SERPINA13PQ6UXR4 307 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 KSR2Q6VAB6 950 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 KRT73Q86Y46 540 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 RAB11FIP4Q86YS3 637 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 SDR16C5Q8N3Y7 309 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 PARD3BQ8TEW8 1205 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 IPCEF1Q8WWN9 437 aaPredicted RBP2.75□□□□□ -1.97
CEP290-204ENST00000547926 CAMK1GQ96NX5 476 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 HEYLQ9NQ87 328 aaPredicted RBP2.75□□□□□ -1.97
CEP290-204ENST00000547926 A0A1W2PPC4 97 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 POC1B-GALNT4F8VUJ3 575 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 THAP12O43422 761 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 NCK2O43639 380 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 MT-CO3P00414 261 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 ARP10275 920 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 ATF7P17544 494 aaPredicted RBP2.75□□□□□ -1.97
CEP290-204ENST00000547926 RBL1P28749 1068 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 FAM187BQ17R55 369 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 CRTC1Q6UUV9 634 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 CATSPERGQ6ZRH7 1159 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 GALNT4Q8N4A0 578 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 LINC01465Q8N7H1 131 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 C8orf58Q8NAV2 365 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 MAFAQ8NHW3 353 aaPredicted RBP2.75□□□□□ -1.97
CEP290-204ENST00000547926 PRR11Q96HE9 360 aaPredicted RBP2.75□□□□□ -1.97
CEP290-204ENST00000547926 FAM227BQ96M60 508 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 SLC25A32Q9H2D1 315 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 TUBA8Q9NY65 449 aaPredicted RBP2.75□□□□□ -1.97
CEP290-204ENST00000547926 TFCP2L1Q9NZI6 479 aa2.75□□□□□ -1.97
CEP290-204ENST00000547926 NKX1-2Q9UD57 310 aaPredicted RBP2.75□□□□□ -1.97
CEP290-204ENST00000547926 FOXN3O00409 490 aaPredicted RBP2.74□□□□□ -1.97
CEP290-204ENST00000547926 SNX2O60749 519 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 NDST3O95803 873 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 PMS2P11Q13670 270 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 ERV3-1Q14264 604 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 HIBCHQ6NVY1 386 aaPredicted RBP2.74□□□□□ -1.97
CEP290-204ENST00000547926 MZT2AQ6P582 158 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 KRT28Q7Z3Y7 464 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 CNGA4Q8IV77 575 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 FSTL5Q8N475 847 aaPredicted RBP2.74□□□□□ -1.97
CEP290-204ENST00000547926 ZNF668Q96K58 619 aaPredicted RBP2.74□□□□□ -1.97
CEP290-204ENST00000547926 ZC3H10Q96K80 434 aaKnown RBP2.74□□□□□ -1.97
CEP290-204ENST00000547926 EFHD1Q9BUP0 239 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 SEMA4CQ9C0C4 833 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 SNX15Q9NRS6 342 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 FNIP2Q9P278 1114 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 KLHL13Q9P2N7 655 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 MYO1AQ9UBC5 1043 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 STEAP1Q9UHE8 339 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 COL15A1P39059 1388 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 CLCA1A8K7I4 914 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 A8MVJ9 347 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 M0R3H8 397 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 APOL1O14791 398 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 AREL1O15033 823 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 TMPRSS11DO60235 418 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 PRAMEF2O60811 474 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 GCATO75600 419 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 CERS1P27544 350 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 EIF4A1P60842 406 aaKnown RBP2.74□□□□□ -1.97
CEP290-204ENST00000547926 SEC23BQ15437 767 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 RAP1GAP2Q684P5 730 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 IL31Q6EBC2 164 aa2.74□□□□□ -1.97
CEP290-204ENST00000547926 ABLIM2Q6H8Q1 611 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms