RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 YJEFN3A6XGL0 299 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 BECN2A8MW95 431 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 E7ENQ6 273 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 THAP12O43422 761 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 LILRB5O75023 590 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 STC2O76061 302 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 LETM1O95202 739 aaPredicted RBP16.65■□□□□ 0.26
DDX54-204ENST00000546898 CALCAP01258 141 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 LCP1P13796 627 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 GPD2P43304 727 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 RPL34P49207 117 aaKnown RBP16.65■□□□□ 0.26
DDX54-204ENST00000546898 RGS7P49802 495 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 APBA1Q02410 837 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 PREPLQ4J6C6 727 aaPredicted RBP16.65■□□□□ 0.26
DDX54-204ENST00000546898 TSSK4Q6SA08 328 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 Q6ZNB5 142 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 C11orf57Q6ZUT1 292 aaPredicted RBP16.65■□□□□ 0.26
DDX54-204ENST00000546898 STK32AQ8WU08 396 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 RNF139Q8WU17 664 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 ZNF606Q8WXB4 792 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 ATRIPQ8WXE1 791 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 EZH1Q92800 747 aaPredicted RBP16.65■□□□□ 0.26
DDX54-204ENST00000546898 ACDQ96AP0 544 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 PLD4Q96BZ4 506 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 PNKPQ96T60 521 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 MARK1Q9P0L2 795 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 MARCH2Q9P0N8 246 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 DNAJC12Q9UKB3 198 aa16.65■□□□□ 0.26
DDX54-204ENST00000546898 K7ESF4 209 aa16.64■□□□□ 0.25
DDX54-204ENST00000546898 PES1O00541 588 aaKnown RBP16.64■□□□□ 0.25
DDX54-204ENST00000546898 SART1O43290 800 aaKnown RBP16.64■□□□□ 0.25
DDX54-204ENST00000546898 TPM2P07951 284 aa16.64■□□□□ 0.25
DDX54-204ENST00000546898 HOXA6P31267 233 aa16.64■□□□□ 0.25
DDX54-204ENST00000546898 USP8P40818 1118 aa16.64■□□□□ 0.25
DDX54-204ENST00000546898 ACADSBP45954 432 aa16.64■□□□□ 0.25
DDX54-204ENST00000546898 MYL5Q02045 173 aa16.64■□□□□ 0.25
DDX54-204ENST00000546898 BSPRYQ5W0U4 402 aa16.64■□□□□ 0.25
DDX54-204ENST00000546898 ETFBKMTQ8IXQ9 262 aa16.64■□□□□ 0.25
DDX54-204ENST00000546898 GOLGA1Q92805 767 aa16.64■□□□□ 0.25
DDX54-204ENST00000546898 HBS1LQ9Y450 684 aaKnown RBP16.64■□□□□ 0.25
DDX54-204ENST00000546898 MYO18AQ92614 2054 aaKnown RBP16.63■□□□□ 0.25
DDX54-204ENST00000546898 OTOGLQ3ZCN5 2332 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 GABBR2O75899 941 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 LMNAP02545 664 aaKnown RBP16.63■□□□□ 0.25
DDX54-204ENST00000546898 LTFP02788 710 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 APODP05090 189 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 PTK2Q05397 1052 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 KCNMA1Q12791 1236 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 ANO4Q32M45 955 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 DPY19L2P1Q6NXN4 242 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 MSANTD2Q6P1R3 559 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 PKN3Q6P5Z2 889 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 ASCL5Q7RTU5 278 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 C12orf40Q86WS4 652 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 TMEM25Q86YD3 366 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 ANKRD20A12PQ8NF67 263 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 RPLP0P6Q8NHW5 317 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 NDRG1Q92597 394 aaKnown RBP16.63■□□□□ 0.25
DDX54-204ENST00000546898 ARHGEF4Q9NR80 690 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 TAB2Q9NYJ8 693 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 TMEM63CQ9P1W3 806 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 WDR35Q9P2L0 1181 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 PCDHGC3Q9UN70 934 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 EML5Q05BV3 1969 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 USP34Q70CQ2 3546 aa16.63■□□□□ 0.25
DDX54-204ENST00000546898 GVINP1Q7Z2Y8 2422 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 SPAG17Q6Q759 2223 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 A0A0A0MRY4 1105 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 SLC12A8A0AV02 714 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 CACNG3O60359 315 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 KAT7O95251 611 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 CORO1AP31146 461 aaKnown RBP16.62■□□□□ 0.25
DDX54-204ENST00000546898 CHKAP35790 457 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 GRIA2P42262 883 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 SLC6A11P48066 632 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 TYRO3Q06418 890 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 KRT31Q15323 416 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 DENND1BQ6P3S1 775 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 NUDT18Q6ZVK8 323 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 SYT13Q7L8C5 426 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 LONP2Q86WA8 852 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 FMNL3Q8IVF7 1028 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 PHTF2Q8N3S3 785 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 EDEM1Q92611 657 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 XPO6Q96QU8 1125 aaKnown RBP16.62■□□□□ 0.25
DDX54-204ENST00000546898 TRIM62Q9BVG3 475 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 BBS2Q9BXC9 721 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 SLC4A5Q9BY07 1137 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 EPC1Q9H2F5 836 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 ACP6Q9NPH0 428 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 PLCB1Q9NQ66 1216 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 ST7Q9NRC1 585 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 FANCLQ9NW38 375 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 C2orf42Q9NWW7 574 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 DEC1Q9P2X7 70 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 AJAP1Q9UKB5 411 aaPredicted RBP16.62■□□□□ 0.25
DDX54-204ENST00000546898 SLC8A2Q9UPR5 921 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 DAAM1Q9Y4D1 1078 aa16.62■□□□□ 0.25
DDX54-204ENST00000546898 CCDC163A0A0D9SF12 145 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 NEDD8-MDP1E9PL57 170 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms