RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 KLHL3Q9UH77 587 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 BAIAP3O94812 1187 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 PAICSP22234 425 aaKnown RBP20.61■□□□□ 0.89
BPTF-208ENST00000544778 ACAD10Q6JQN1 1059 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 ACTR8Q9H981 624 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 AHSPQ9NZD4 102 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 A8MX80 341 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 IGFBP4P22692 258 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 AGBL2Q5U5Z8 902 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 TMEM26Q6ZUK4 368 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 CHST13Q8NET6 341 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 TBX20Q9UMR3 447 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 CCDC130P13994 396 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 SEL1L3Q68CR1 1132 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 SLC30A9Q6PML9 568 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 FAM120BQ96EK7 910 aaKnown RBP20.6■□□□□ 0.89
BPTF-208ENST00000544778 BTBD9Q96Q07 612 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 SH3GLB1Q9Y371 365 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 GLRA3O75311 464 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 COILP38432 576 aaPredicted RBP20.6■□□□□ 0.89
BPTF-208ENST00000544778 CUL2Q13617 745 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 CCNIQ14094 377 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 CSHL1Q14406 222 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 NR6A1Q15406 480 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 FGD3Q5JSP0 725 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 KCNT1Q5JUK3 1230 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 COMMD8Q9NX08 183 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 UBQLN1Q9UMX0 589 aaKnown RBP20.6■□□□□ 0.89
BPTF-208ENST00000544778 TCOF1Q13428 1488 aaKnown RBP20.6■□□□□ 0.89
BPTF-208ENST00000544778 COQ7Q99807 217 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 TLR8Q9NR97 1041 aaKnown RBP20.6■□□□□ 0.89
BPTF-208ENST00000544778 CTSEP14091 401 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 RPL10AP62906 217 aaKnown RBP20.6■□□□□ 0.89
BPTF-208ENST00000544778 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.6■□□□□ 0.89
BPTF-208ENST00000544778 EFCAB1Q9HAE3 211 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 CNTNAP2Q9UHC6 1331 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 CAPN15O75808 1086 aa20.6■□□□□ 0.89
BPTF-208ENST00000544778 H3BN98 237 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 NDUFS2O75306 463 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 OR6B1O95007 311 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 OTUD4Q01804 1114 aaKnown RBP20.59■□□□□ 0.89
BPTF-208ENST00000544778 SCAIQ8N9R8 606 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 KCNB2Q92953 911 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 CLIP3Q96DZ5 547 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 FANCEQ9HB96 536 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 OVOS2A0A0G2JMS6 1433 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 OVOS2A0A0J9YW53 1432 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 OVOS2Q6IE36 1432 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 MTRF1O75570 445 aaKnown RBP20.59■□□□□ 0.89
BPTF-208ENST00000544778 LTFP02788 710 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 PLEKHA7Q6IQ23 1121 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 SDR42E2A6NKP2 422 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 KCNQ2O43526 872 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 RPN2P04844 631 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 THP07101 528 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 THRAP10827 490 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 HOXA2O43364 376 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 MARSP56192 900 aaKnown RBP20.59■□□□□ 0.89
BPTF-208ENST00000544778 IL2P60568 153 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 FOXR1Q6PIV2 292 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 CYP4X1Q8N118 509 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 FRMD6Q96NE9 622 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 SH3BGRLO75368 114 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 SRGNP10124 158 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 SLC29A2Q14542 456 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 PREPLQ4J6C6 727 aaPredicted RBP20.59■□□□□ 0.89
BPTF-208ENST00000544778 FAM9CQ8IZT9 166 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 DAGLAQ9Y4D2 1042 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 ADGRL2O95490 1459 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 ALDH2P05091 517 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 PEX5P50542 639 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 FAM20CQ8IXL6 584 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 ARRDC4Q8NCT1 418 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 MDM1Q8TC05 714 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 SOHLH2Q9NX45 425 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 HEY2Q9UBP5 337 aa20.59■□□□□ 0.89
BPTF-208ENST00000544778 PIK3R1P27986 724 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 BOP1Q14137 746 aaKnown RBP20.58■□□□□ 0.89
BPTF-208ENST00000544778 SAMD7Q7Z3H4 446 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 EPS8L2Q9H6S3 715 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 STARD7Q9NQZ5 370 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 AP3D1O14617 1153 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 PQBP1O60828 265 aaKnown RBP20.58■□□□□ 0.89
BPTF-208ENST00000544778 PTPN3P26045 913 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 BIKQ13323 160 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 ROPN1BQ9BZX4 212 aaPredicted RBP20.58■□□□□ 0.89
BPTF-208ENST00000544778 ROPN1Q9HAT0 212 aaPredicted RBP20.58■□□□□ 0.89
BPTF-208ENST00000544778 EIF3HO15372 352 aaKnown RBP eCLIP20.58■□□□□ 0.896e-7■■■□□ 14.7
BPTF-208ENST00000544778 ATG7O95352 703 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 HIST1H2ABP04908 130 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 IL6P05231 212 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 PSMB9P28065 219 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 VHLP40337 213 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 NAA30Q147X3 362 aaPredicted RBP20.58■□□□□ 0.89
BPTF-208ENST00000544778 NDUFAF6Q330K2 333 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 HIST3H2AQ7L7L0 130 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 HIST1H2ACQ93077 130 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 FOXP3Q9BZS1 431 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 C6orf62Q9GZU0 229 aaPredicted RBP20.58■□□□□ 0.89
BPTF-208ENST00000544778 KCNH7Q9NS40 1196 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms