RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 LRRC40Q9H9A6 602 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 DAGLAQ9Y4D2 1042 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 F5H5T6 163 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 LTFP02788 710 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 CLTBP09497 229 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 HERVK_113P62684 666 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 KLHL24Q6TFL4 600 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 BCL2L14Q9BZR8 327 aa15.88■□□□□ 0.13
CHD4-210ENST00000544040 MRPL42Q9Y6G3 142 aaKnown RBP15.88■□□□□ 0.13
CHD4-210ENST00000544040 CD44P16070 742 aaKnown RBP15.87■□□□□ 0.13
CHD4-210ENST00000544040 CDC42EP1Q00587 391 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 TSGA10IPQ3SY00 556 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 GATAD2AQ86YP4 633 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 POU5F2Q8N7G0 328 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 RMND5BQ96G75 393 aaPredicted RBP15.87■□□□□ 0.13
CHD4-210ENST00000544040 TEX13BQ9BXU2 312 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 CLPBQ9H078 707 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 GPRC5CQ9NQ84 441 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 SH3BP4Q9P0V3 963 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 ROBO2Q9HCK4 1378 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 KDM5CP41229 1560 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 FAM220BPB1ANY3 271 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 TBX3O15119 743 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 FDX1P10109 184 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 STX4Q12846 297 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 FAM98BQ52LJ0 330 aaKnown RBP15.87■□□□□ 0.13
CHD4-210ENST00000544040 GTF3C4Q9UKN8 822 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 FKBP6O75344 327 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 PPIDQ08752 370 aaKnown RBP15.87■□□□□ 0.13
CHD4-210ENST00000544040 SLFN11Q7Z7L1 901 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 MIEF1Q9NQG6 463 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 NLRP1Q9C000 1473 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 KBTBD13C9JR72 458 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 PHACTR4Q8IZ21 702 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 KYQ8NBH2 561 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 DGCR6LQ9BY27 220 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 KCNH7Q9NS40 1196 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 NCAPD2Q15021 1401 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 SLC37A4O43826 429 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 SLC11A2P49281 568 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 TSHZ1Q6ZSZ6 1077 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 TRAPPC9Q96Q05 1148 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 UBXN6Q9BZV1 441 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 ELOVL6Q9H5J4 265 aa15.87■□□□□ 0.13
CHD4-210ENST00000544040 ARIH1Q9Y4X5 557 aaPredicted RBP15.87■□□□□ 0.13
CHD4-210ENST00000544040 TPH1P17752 444 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 SRP54P61011 504 aaKnown RBP15.86■□□□□ 0.13
CHD4-210ENST00000544040 ZNF772Q68DY9 489 aaPredicted RBP15.86■□□□□ 0.13
CHD4-210ENST00000544040 CASP12Q6UXS9 341 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 CBWD2Q8IUF1 395 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 EID3Q8N140 333 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 CPB2Q96IY4 423 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 FRMD8Q9BZ67 464 aaPredicted RBP15.86■□□□□ 0.13
CHD4-210ENST00000544040 OSBPL6Q9BZF3 934 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 NT5MQ9NPB1 228 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 ARMCX1Q9P291 453 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 IFNA14P01570 189 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 FCGR1AP12314 374 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 RARGP13631 454 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 TRAF3Q13114 568 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 NDUFA5Q16718 116 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 N4BP2L1Q5TBK1 243 aaPredicted RBP15.86■□□□□ 0.13
CHD4-210ENST00000544040 NOTUMQ6P988 496 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 RNASE11Q8TAA1 199 aaKnown RBP15.86■□□□□ 0.13
CHD4-210ENST00000544040 FBXO25Q8TCJ0 367 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 PRR36Q9H6K5 1346 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 TAF4O00268 1085 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 MAGEB2O15479 319 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 MED26O95402 600 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 LRG1P02750 347 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 CHRNA5P30532 468 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 RAD23AP54725 363 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 SPOCD1Q6ZMY3 1216 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 SLC47A2Q86VL8 602 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 OR6Y1Q8NGX8 325 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 HASPINQ8TF76 798 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 RNF145Q96MT1 663 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 ERGIC2Q96RQ1 377 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 JMJD4Q9H9V9 463 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 H3BN98 237 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 IL6P05231 212 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 ODC1P11926 461 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 TCF7P36402 384 aaPredicted RBP15.86■□□□□ 0.13
CHD4-210ENST00000544040 FGD3Q5JSP0 725 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 SLC26A11Q86WA9 606 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 DHFR2Q86XF0 187 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 ELMO3Q96BJ8 720 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 TTLL13PA6NNM8 815 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 GLP2RO95838 553 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 CCT3P49368 545 aaKnown RBP15.86■□□□□ 0.13
CHD4-210ENST00000544040 ANTXR2P58335 489 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 OSGEPL1Q9H4B0 414 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 LIMD1Q9UGP4 676 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 USP18Q9UMW8 372 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 NAALADL1Q9UQQ1 740 aa15.86■□□□□ 0.13
CHD4-210ENST00000544040 CLOCKO15516 846 aa15.85■□□□□ 0.13
CHD4-210ENST00000544040 CYP11B1P15538 503 aa15.85■□□□□ 0.13
CHD4-210ENST00000544040 PLCL1Q15111 1095 aa15.85■□□□□ 0.13
CHD4-210ENST00000544040 DNAJC14Q6Y2X3 702 aaPredicted RBP15.85■□□□□ 0.13
CHD4-210ENST00000544040 MICALL2Q8IY33 904 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms