RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RBM12Q9NTZ6 932 aaKnown RBP6□□□□□ -1.45
CPSF7-220ENST00000541963 SPATA6Q9NWH7 488 aaPredicted RBP6□□□□□ -1.45
CPSF7-220ENST00000541963 ORC3Q9UBD5 711 aaPredicted RBP6□□□□□ -1.45
CPSF7-220ENST00000541963 GABBR1Q9UBS5 961 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 INTUQ9ULD6 942 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 TPCN1Q9ULQ1 816 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 LIMCH1Q9UPQ0 1083 aa6□□□□□ -1.45
CPSF7-220ENST00000541963 SMG5Q9UPR3 1016 aaKnown RBP6□□□□□ -1.45
CPSF7-220ENST00000541963 NRCAMQ92823 1304 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 STK36Q9NRP7 1315 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 SCN10AQ9Y5Y9 1956 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 CCDC194A0A1B0GVG4 234 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 GSTTP1A0A1W2PQM5 241 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 FAM171A2A8MVW0 826 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 KIF28PB7ZC32 967 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 IPO5O00410 1097 aaKnown RBP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 AKR1B10O60218 316 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 PRAMEF4O60810 478 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 SEC24DO94855 1032 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 MYL1P05976 194 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 LTA4HP09960 611 aaKnown RBP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 SMIM10L2AP0DMW4 78 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 SMIM10L2BP0DMW5 78 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 ARP10275 920 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 ZNF28P17035 718 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 PDCP20941 246 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 CIITAP33076 1130 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 GNALP38405 381 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 SLC26A2P50443 739 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 STAT5BP51692 787 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 TOP3AQ13472 1001 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 SSPNQ14714 243 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 NOMO1Q15155 1222 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 NONOQ15233 471 aaKnown RBP eCLIP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 PRR16Q569H4 304 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 PRR31Q5SQ13 230 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 C9orf50Q5SZB4 431 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 FAM109BQ6ICB4 259 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 PPP4R4Q6NUP7 873 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 MIS18BP1Q6P0N0 1132 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 LRRC8DQ7L1W4 858 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 EPM2AIP1Q7L775 607 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 PLPPR4Q7Z2D5 763 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 SMAP1Q8IYB5 467 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 GRAMD1CQ8IYS0 662 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 GPR156Q8NFN8 814 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 CYP2W1Q8TAV3 490 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 ZCCHC14Q8WYQ9 949 aaKnown RBP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 HERVK_113Q902F9 699 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 GCDHQ92947 438 aaPredicted RBP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 LPPQ93052 612 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 GTF3C6Q969F1 213 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 C7orf25Q9BPX7 421 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 RNPEPQ9H4A4 650 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 C1orf112Q9NSG2 853 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.99□□□□□ -1.45
CPSF7-220ENST00000541963 OBP2AQ9NY56 170 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 TUBD1Q9UJT1 453 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 ZDHHC9Q9Y397 364 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 SLC4A7Q9Y6M7 1214 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 LTBP2Q14767 1821 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 EMSYQ7Z589 1322 aa5.99□□□□□ -1.45
CPSF7-220ENST00000541963 KAT6AQ92794 2004 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 RSPH10B2B2RC85 870 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 FAM86B1E9PN63 330 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 DDX39AO00148 427 aaKnown RBP5.98□□□□□ -1.45
CPSF7-220ENST00000541963 PAX4O43316 350 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 BAIAP3O94812 1187 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 KLHL18O94889 574 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 BAG4O95429 457 aaKnown RBP5.98□□□□□ -1.45
CPSF7-220ENST00000541963 FAM86B2P0C5J1 330 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 RSPH10BP0C881 870 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 CKBP12277 381 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 SFNP31947 248 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 KRT2P35908 639 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 THPOP40225 353 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 MCM2P49736 904 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 EPHB4P54760 987 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 PER3P56645 1201 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 ACTR2P61160 394 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 CD69Q07108 199 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 MESP2Q0VG99 397 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 PPFIA1Q13136 1202 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 RABEP1Q15276 862 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 SAFBQ15424 915 aaKnown RBP eCLIP5.98□□□□□ -1.45
CPSF7-220ENST00000541963 RAB30Q15771 203 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 ME3Q16798 604 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 ZNF568Q3ZCX4 644 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 Q4G0T1 1027 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 ZMAT1Q5H9K5 638 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 TAF2Q6P1X5 1199 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 MOXD1Q6UVY6 613 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 USP45Q70EL2 814 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 DEFB128Q7Z7B8 93 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 FAM124AQ86V42 546 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 SERINC5Q86VE9 423 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 UNC5BQ8IZJ1 945 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 CAMKK1Q8N5S9 505 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 DEFB123Q8N688 67 aa5.98□□□□□ -1.45
CPSF7-220ENST00000541963 NECAB1Q8N987 351 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms