RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 NR2E3Q9Y5X4 410 aa6.4□□□□□ -1.38
LMO3-225ENST00000541295 CICQ96RK0 1608 aaPredicted RBP6.4□□□□□ -1.38
LMO3-225ENST00000541295 MYH7P12883 1935 aa6.4□□□□□ -1.38
LMO3-225ENST00000541295 IFIT3O14879 490 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 ADAM11O75078 769 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 PIAS2O75928 621 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 APEHP13798 732 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 TM4SF1P30408 202 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 IARSP41252 1262 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 HNMTP50135 292 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 ETF1P62495 437 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 PHC1P78364 1004 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 EN1Q05925 392 aaPredicted RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 CDC20Q12834 499 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 TRIM25Q14258 630 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 HERC3Q15034 1050 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 ABCB5Q2M3G0 1257 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 NFRKBQ6P4R8 1299 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 PAPD4Q6PIY7 484 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 MICU3Q86XE3 530 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 SCUBE3Q8IX30 993 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 MB21D2Q8IYB1 491 aaPredicted RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 GALNT11Q8NCW6 608 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 LRRC8CQ8TDW0 803 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 SCFD2Q8WU76 684 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 SLC22A18Q96BI1 424 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 PPP1R36Q96LQ0 422 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 RPRD1AQ96P16 312 aaPredicted RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 DEPDC7Q96QD5 511 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 MYL10Q9BUA6 226 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 SPATA16Q9BXB7 569 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 MYLK2Q9H1R3 596 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 CCDC86Q9H6F5 360 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 ETNK2Q9NVF9 386 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 FAM153AQ9UHL3 310 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 DERAQ9Y315 318 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 TRPV2Q9Y5S1 764 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 PARP3Q9Y6F1 533 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 TNRC6CQ9HCJ0 1690 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 NEDD4P46934 1319 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 COL1A1P02452 1464 aaPredicted RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 LZTS3O60299 673 aaPredicted RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 SYNCRIPO60506 623 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 SMPD2O60906 423 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 N4BP1O75113 896 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 PRDM1O75626 825 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 CCNG1P51959 295 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 AIF1P55008 147 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 GUCY2DQ02846 1103 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 STK4Q13043 487 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 ZNF211Q13398 564 aaPredicted RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 SMAD1Q15797 465 aaKnown RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 BTBD8Q5XKL5 378 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 PM20D1Q6GTS8 502 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 POTEAQ6S8J7 498 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 HHIPL2Q6UWX4 724 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 CACNA2D4Q7Z3S7 1137 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 KIAA0907Q7Z7F0 614 aaPredicted RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 MIB1Q86YT6 1006 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 C7orf31Q8N865 590 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 HEXDCQ8WVB3 486 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 UCMAQ8WVF2 138 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 SCFD1Q8WVM8 642 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 BSNDQ8WZ55 320 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 TMIGD2Q96BF3 282 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 RMND5BQ96G75 393 aaPredicted RBP6.4□□□□□ -1.39
LMO3-225ENST00000541295 COX4I2Q96KJ9 171 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 PI4K2AQ9BTU6 479 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 EPS8L2Q9H6S3 715 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 KLHL3Q9UH77 587 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 PCDHGA11Q9Y5H2 935 aa6.4□□□□□ -1.39
LMO3-225ENST00000541295 LAMB2P55268 1798 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 A0A088AWK7 358 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 FAM237AA0A1B0GTK4 181 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 E2F8A0AVK6 867 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 FAM221AA4D161 298 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 KLRG2A4D1S0 409 aaPredicted RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 EIF4E1BA6NMX2 242 aaKnown RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 ATP6V1G2-DDX39BF2Z307 99 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 SMIM22K7EJ46 135 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 POLRMTO00411 1230 aaKnown RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 SCAMP1O15126 338 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 NOS1APO75052 506 aaPredicted RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 ANXA6P08133 673 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 GHRP10912 638 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 EDN3P14138 238 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 ATF4P18848 351 aaPredicted RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 CCNFP41002 786 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 RGS2P41220 211 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 RGS19P49795 217 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 CACNB3P54284 484 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 PTPN5P54829 565 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 TGFB2P61812 414 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 CAPRIN1Q14444 709 aaKnown RBP6.39□□□□□ -1.39
LMO3-225ENST00000541295 C1orf146Q5VVC0 180 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 WDR73Q6P4I2 378 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 FOXR2Q6PJQ5 311 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 DENND6AQ8IWF6 608 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 PM20D2Q8IYS1 436 aa6.39□□□□□ -1.39
LMO3-225ENST00000541295 ARHGAP24Q8N264 748 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms