RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 BFSP2Q13515 415 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 TRIM29Q14134 588 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 GRM7Q14831 915 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 LRIT3Q3SXY7 679 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 PPP4R3AQ6IN85 833 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 SWSAP1Q6NVH7 229 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 LRRC8DQ7L1W4 858 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 PLPPR4Q7Z2D5 763 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 TRMT1LQ7Z2T5 733 aaKnown RBP7.07□□□□□ -1.28
TTR-203ENST00000541025 FBXO18Q8NFZ0 1043 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 AFAP1L1Q8TED9 768 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 NINJ1Q92982 152 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 FOXRED1Q96CU9 486 aaPredicted RBP7.07□□□□□ -1.28
TTR-203ENST00000541025 FOXB1Q99853 325 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 AZI2Q9H6S1 392 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 KCNMB3Q9NPA1 279 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 TBC1D22BQ9NU19 505 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 AURKAIP1Q9NWT8 199 aaPredicted RBP7.07□□□□□ -1.28
TTR-203ENST00000541025 GABBR1Q9UBS5 961 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 COL4A6Q14031 1691 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 NRCAMQ92823 1304 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 MBLAC1A4D2B0 266 aaPredicted RBP7.06□□□□□ -1.28
TTR-203ENST00000541025 TMEM150BA6NC51 233 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 GRXCR1A8MXD5 290 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 SLC26A4O43511 780 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 GJB2P29033 226 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 MECP2P51608 486 aaKnown RBP7.06□□□□□ -1.28
TTR-203ENST00000541025 MIS18BP1Q6P0N0 1132 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 Q7L0L9 218 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 RTN4RL1Q86UN2 441 aaPredicted RBP7.06□□□□□ -1.28
TTR-203ENST00000541025 C1orf210Q8IVY1 113 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 SMAP1Q8IYB5 467 aaPredicted RBP7.06□□□□□ -1.28
TTR-203ENST00000541025 FAM184AQ8NB25 1140 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 OR14K1Q8NGZ2 314 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 CAGE1Q8TC20 777 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 ATP8B4Q8TF62 1192 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 DNAJB3Q8WWF6 145 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 HERVK_113Q902F9 699 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 RIT2Q99578 217 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 TEKT3Q9BXF9 490 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 TMEM60Q9H2L4 133 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 ZNF302Q9NR11 478 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 ACSS2Q9NR19 701 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 SAMD15Q9P1V8 674 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 WRAP73Q9P2S5 460 aaPredicted RBP7.06□□□□□ -1.28
TTR-203ENST00000541025 MAGEC2Q9UBF1 373 aaPredicted RBP7.06□□□□□ -1.28
TTR-203ENST00000541025 TUBE1Q9UJT0 475 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 PCDHA10Q9Y5I2 948 aa7.06□□□□□ -1.28
TTR-203ENST00000541025 TCHHQ07283 1943 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 NPIPB8E9PQR5 432 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 SUV39H1O43463 412 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 H2AFYO75367 372 aaKnown RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 STBD1O95210 358 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 FGBP02675 491 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 CHRNA1P02708 482 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 CXCL10P02778 98 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 GCFC2P16383 781 aaKnown RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 ACRV1P26436 265 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 KLRC1P26715 233 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 MCM7P33993 719 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 RFC2P35250 354 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 MSX2P35548 267 aaPredicted RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 MCM2P49736 904 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 SLC26A2P50443 739 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 TOB1P50616 345 aaPredicted RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 PRKCEQ02156 737 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 MGAT3Q09327 533 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 PPP2R5CQ13362 524 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 CUL4AQ13619 759 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 FAM160B1Q5W0V3 765 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 PSRC1Q6PGN9 363 aaPredicted RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 KLHDC10Q6PID8 442 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 MTHFD1LQ6UB35 978 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 MIER3Q7Z3K6 550 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 TMCO2Q7Z6W1 182 aaPredicted RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 GPR135Q8IZ08 494 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 BCL6BQ8N143 479 aaPredicted RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 ZNF808Q8N4W9 903 aaPredicted RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 RABGGTAQ92696 567 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 ERCC4Q92889 916 aaPredicted RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 MTMR9Q96QG7 549 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 SH2D3AQ9BRG2 576 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 FAM49AQ9H0Q0 323 aaPredicted RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 FOXP1Q9H334 677 aaPredicted RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 INTS7Q9NVH2 962 aaKnown RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 SAE1Q9UBE0 346 aaPredicted RBP7.05□□□□□ -1.28
TTR-203ENST00000541025 TTC3P53804 2025 aa7.05□□□□□ -1.28
TTR-203ENST00000541025 PLXNA4Q9HCM2 1894 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 PRUNE2Q8WUY3 3088 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 RRN3P2A6NIE6 340 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 RSPH10B2B2RC85 870 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 TBX3O15119 743 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 HBP1O60381 514 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 NEMFO60524 1076 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 C22orf31O95567 290 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 CYP17A1P05093 508 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 PFKMP08237 780 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 JMJD7P0C870 316 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 RSPH10BP0C881 870 aa7.04□□□□□ -1.28
TTR-203ENST00000541025 U2AF2P26368 475 aaKnown RBP eCLIP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms