RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 DAOAP59103 153 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 KCNMA1Q12791 1236 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 KCNJ12Q14500 433 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 HSP90AA4PQ58FG1 418 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 TCP11X2Q5H9J9 407 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 TADA2BQ86TJ2 420 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 TMEM25Q86YD3 366 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 SUMF1Q8NBK3 374 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 EXOC4Q96A65 974 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 HSFY1Q96LI6 401 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 LRRC4Q9HBW1 653 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 ACP6Q9NPH0 428 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 SPHK2Q9NRA0 654 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 MARK1Q9P0L2 795 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 NFE2L3Q9Y4A8 694 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 GVINP1Q7Z2Y8 2422 aa14.89□□□□□ -0.03
USP28-209ENST00000540925 FAM186AA6NE01 2351 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 ANTXRLA6NF34 631 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 KRT5P13647 590 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 PRKCSHP14314 528 aaPredicted RBP14.88□□□□□ -0.03
USP28-209ENST00000540925 DMWDQ09019 674 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 BSPRYQ5W0U4 402 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 C11orf57Q6ZUT1 292 aaPredicted RBP14.88□□□□□ -0.03
USP28-209ENST00000540925 CREBRFQ8IUR6 639 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 STK32AQ8WU08 396 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 ZNF606Q8WXB4 792 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 IRGQQ8WZA9 623 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 NAA15Q9BXJ9 866 aaKnown RBP14.88□□□□□ -0.03
USP28-209ENST00000540925 SLC4A5Q9BY07 1137 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 EPC1Q9H2F5 836 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 TMEM63CQ9P1W3 806 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 CYTH4Q9UIA0 394 aa14.88□□□□□ -0.03
USP28-209ENST00000540925 LMNAP02545 664 aaKnown RBP14.87□□□□□ -0.03
USP28-209ENST00000540925 RGS7P49802 495 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 NRLP54845 237 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 COG7P83436 770 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 GAD2Q05329 585 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 GOLGA8FQ08AF8 430 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 GOLGA8DPQ0D2H9 430 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 EFEMP1Q12805 493 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 PPP2R5DQ14738 602 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 TRIP4Q15650 581 aaPredicted RBP14.87□□□□□ -0.03
USP28-209ENST00000540925 CCDC183Q5T5S1 534 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 MSANTD2Q6P1R3 559 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 DENND1BQ6P3S1 775 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 MIB1Q86YT6 1006 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 SFTPA1Q8IWL2 248 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 FAM217AQ8IXS0 508 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 SIX6OS1Q8N1H7 587 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 USP33Q8TEY7 942 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 CLEC4CQ8WTT0 213 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 PNKPQ96T60 521 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 HSD3B7Q9H2F3 369 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 MARCH2Q9P0N8 246 aa14.87□□□□□ -0.03
USP28-209ENST00000540925 GFRA2O00451 464 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 CACNG3O60359 315 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 ATG13O75143 517 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 TULP3O75386 442 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 FBXO21O94952 628 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 LETM1O95202 739 aaPredicted RBP14.86□□□□□ -0.03
USP28-209ENST00000540925 FYNP06241 537 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 LCP1P13796 627 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 GNA15P30679 374 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 CLCN1P35523 988 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 KIR2DL1P43626 348 aaPredicted RBP14.86□□□□□ -0.03
USP28-209ENST00000540925 NCAPHQ15003 741 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 STX1AQ16623 288 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 ARHGAP44Q17R89 818 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 KLHDC7AQ5VTJ3 777 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 SYT13Q7L8C5 426 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 TMEM110Q86TL2 294 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 FAM71AQ8IYT1 594 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 WDTC1Q8N5D0 677 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 RPLP0P6Q8NHW5 317 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 ABCC13Q9NSE7 274 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 OLA1Q9NTK5 396 aaKnown RBP14.86□□□□□ -0.03
USP28-209ENST00000540925 POLR3BQ9NW08 1133 aaPredicted RBP14.86□□□□□ -0.03
USP28-209ENST00000540925 ANO10Q9NW15 660 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 RASAL2Q9UJF2 1139 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 STOML2Q9UJZ1 356 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 LSM7Q9UK45 103 aaKnown RBP14.86□□□□□ -0.03
USP28-209ENST00000540925 FBXO10Q9UK96 956 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 DNAJC12Q9UKB3 198 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 PCDHGC3Q9UN70 934 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 ZNF510Q9Y2H8 683 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 ATG2BQ96BY7 2078 aa14.86□□□□□ -0.03
USP28-209ENST00000540925 EP300Q09472 2414 aaPredicted RBP14.85□□□□□ -0.03
USP28-209ENST00000540925 CCDC163A0A0D9SF12 145 aa14.85□□□□□ -0.03
USP28-209ENST00000540925 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.85□□□□□ -0.03
USP28-209ENST00000540925 FOXN3O00409 490 aaPredicted RBP14.85□□□□□ -0.03
USP28-209ENST00000540925 MED7O43513 233 aa14.85□□□□□ -0.03
USP28-209ENST00000540925 KAT7O95251 611 aa14.85□□□□□ -0.03
USP28-209ENST00000540925 PENKP01210 267 aaPredicted RBP14.85□□□□□ -0.03
USP28-209ENST00000540925 IGLV3-27P01718 113 aa14.85□□□□□ -0.03
USP28-209ENST00000540925 CORO1AP31146 461 aaKnown RBP14.85□□□□□ -0.03
USP28-209ENST00000540925 GRIA2P42262 883 aa14.85□□□□□ -0.03
USP28-209ENST00000540925 KRT31Q15323 416 aa14.85□□□□□ -0.03
USP28-209ENST00000540925 BTBD8Q5XKL5 378 aa14.85□□□□□ -0.03
USP28-209ENST00000540925 BEND5Q7L4P6 421 aa14.85□□□□□ -0.03
USP28-209ENST00000540925 APTXQ7Z2E3 356 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms