RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NPY5RQ15761 445 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 CRY1Q16526 586 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 NT5DC1Q5TFE4 455 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 ATF7IP2Q5U623 682 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 LARP1BQ659C4 914 aaKnown RBP4.99□□□□□ -1.61
SNHG1-214ENST00000540865 NAIF1Q69YI7 327 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-214ENST00000540865 TRIM68Q6AZZ1 485 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 LRFN4Q6PJG9 635 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 BNC2Q6ZN30 1099 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-214ENST00000540865 MAEAQ7L5Y9 396 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 TMPRSS7Q7RTY8 843 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 NEK8Q86SG6 692 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 LURAP1LQ8IV03 231 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 ZNF843Q8N446 348 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 FBXL16Q8N461 479 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 MINDY1Q8N5J2 469 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 MDGA1Q8NFP4 955 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 DEPTORQ8TB45 409 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 USP33Q8TEY7 942 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 USP13Q92995 863 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-214ENST00000540865 ATP2A3Q93084 1043 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 RHOVQ96L33 236 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 MYRFLQ96LU7 910 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 PGLYRP2Q96PD5 576 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 FANCD2OSQ96PS1 177 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 KIF2CQ99661 725 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 RSRP1Q9BUV0 290 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 TDP1Q9NUW8 608 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 CRIM1Q9NZV1 1036 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 MMP17Q9ULZ9 603 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 TNFSF13BQ9Y275 285 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 TICRRQ7Z2Z1 1910 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 GON4LQ3T8J9 2241 aa4.99□□□□□ -1.61
SNHG1-214ENST00000540865 VWA8A3KMH1 1905 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 K7EQS6 105 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 CAPN9O14815 690 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 AP5Z1O43299 807 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 CCNT1O60563 726 aaKnown RBP4.98□□□□□ -1.61
SNHG1-214ENST00000540865 CBFA2T3O75081 653 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 GJB3O75712 270 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 DEXIO95424 95 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 LARGE1O95461 756 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 F13A1P00488 732 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 OR4Q2P0C623 313 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 TYMPP19971 482 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ATP2B1P20020 1258 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 U2AF2P26368 475 aaKnown RBP eCLIP4.98□□□□□ -1.613e-14■■■□□ 18.8
SNHG1-214ENST00000540865 ASPAP45381 313 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ABCG1P45844 678 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 AARSP49588 968 aaKnown RBP eCLIP4.98□□□□□ -1.615e-21■□□□□ 9.8
SNHG1-214ENST00000540865 MRPS21P82921 87 aaKnown RBP4.98□□□□□ -1.61
SNHG1-214ENST00000540865 CYP4F3Q08477 520 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 SSRP1Q08945 709 aaKnown RBP4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ADCK5Q3MIX3 580 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 HSF5Q4G112 596 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-214ENST00000540865 C2orf27AQ580R0 203 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ZC3H12AQ5D1E8 599 aaKnown RBP4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ARMCX5Q6P1M9 558 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 SLC36A4Q6YBV0 504 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 Q6ZUG5 572 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ARMCX6Q7L4S7 300 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 USP37Q86T82 979 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 SLCO6A1Q86UG4 719 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 MON1AQ86VX9 555 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 NAXDQ8IW45 347 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 FAM20CQ8IXL6 584 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ABCA7Q8IZY2 2146 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 PNPLA1Q8N8W4 532 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 GOLM1Q8NBJ4 401 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ATAD1Q8NBU5 361 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 FBXO27Q8NI29 283 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 PIGOQ8TEQ8 1089 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 OSCP1Q8WVF1 389 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 RLN3Q8WXF3 142 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 BRF1Q92994 677 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 RNF34Q969K3 372 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 C18orf25Q96B23 403 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-214ENST00000540865 PLPPR2Q96GM1 343 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 IFT74Q96LB3 600 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 CAMK1GQ96NX5 476 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ACAP3Q96P50 834 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 AGXT2Q9BYV1 514 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ZDHHC5Q9C0B5 715 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 MIR1-1HGQ9H1L0 117 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 CDT1Q9H211 546 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 PRORYQ9H606 182 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 PTPRHQ9HD43 1115 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 FSCN3Q9NQT6 498 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 DUS2Q9NX74 493 aaKnown RBP4.98□□□□□ -1.61
SNHG1-214ENST00000540865 PCDHA12Q9UN75 941 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 CCL26Q9Y258 94 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 HIF3AQ9Y2N7 669 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 NBPF19A0A087WUL8 3843 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 COL12A1Q99715 3063 aa4.98□□□□□ -1.61
SNHG1-214ENST00000540865 ATXN2Q99700 1313 aaKnown RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 ATMQ13315 3056 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TEX15Q9BXT5 2789 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 PTPN13Q12923 2485 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 A0A1W2PQD8 194 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 HMX2A2RU54 273 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms