RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 TSPAN16Q9UKR8 245 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 PSMD12O00232 456 aaPredicted RBP11.53□□□□□ -0.56
LINC00346-201ENST00000538077 RNF103O00237 685 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 ARHGEF9O43307 516 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 CRTAMO95727 393 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 MLH1P40692 756 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 CCNG1P51959 295 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 SFSWAPQ12872 951 aaKnown RBP11.53□□□□□ -0.56
LINC00346-201ENST00000538077 TERF2Q15554 542 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 MOB2Q70IA6 237 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 PPP1R14AQ96A00 147 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 MAP3K14Q99558 947 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 DMAP1Q9NPF5 467 aaPredicted RBP11.53□□□□□ -0.56
LINC00346-201ENST00000538077 GPRC5DQ9NZD1 345 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 PCDHAC2Q9Y5I4 1007 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 GOLGA8TH3BQL2 631 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 AKR1A1P14550 325 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 TUBP50607 506 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 DENND1BQ6P3S1 775 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 MARK2Q7KZI7 788 aaKnown RBP11.53□□□□□ -0.56
LINC00346-201ENST00000538077 KRT78Q8N1N4 520 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 ZMAT2Q96NC0 199 aaKnown RBP11.53□□□□□ -0.56
LINC00346-201ENST00000538077 LNPEPQ9UIQ6 1025 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 ZMYM5Q9UJ78 669 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 USP15Q9Y4E8 981 aaPredicted RBP11.53□□□□□ -0.56
LINC00346-201ENST00000538077 MGAT4DA6NG13 374 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 PDZK1P1A8MUH7 402 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 PGK1P00558 417 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 MUTP22033 750 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 DNAJC3Q13217 504 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 BMPR2Q13873 1038 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 TNIP2Q8NFZ5 429 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 PIK3R5Q8WYR1 880 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 SEC16BQ96JE7 1060 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 ZBTB45Q96K62 511 aaPredicted RBP11.53□□□□□ -0.56
LINC00346-201ENST00000538077 WDR27A2RRH5 827 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 SHMT1P34896 483 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 CLK2P49760 499 aaKnown RBP11.52□□□□□ -0.56
LINC00346-201ENST00000538077 KHDRBS2Q5VWX1 349 aaKnown RBP11.52□□□□□ -0.56
LINC00346-201ENST00000538077 LRIG3Q6UXM1 1119 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 SPOCD1Q6ZMY3 1216 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 SLC13A5Q86YT5 568 aaPredicted RBP11.52□□□□□ -0.56
LINC00346-201ENST00000538077 CD302Q8IX05 232 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 USP13Q92995 863 aaPredicted RBP11.52□□□□□ -0.56
LINC00346-201ENST00000538077 LPPQ93052 612 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 RSPH9Q9H1X1 276 aaPredicted RBP11.52□□□□□ -0.56
LINC00346-201ENST00000538077 ITGA11Q9UKX5 1188 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 MAP2P11137 1827 aaKnown RBP11.52□□□□□ -0.56
LINC00346-201ENST00000538077 O00370 1275 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.56
LINC00346-201ENST00000538077 MTSS1O43312 755 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 CDH16O75309 829 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 VIL1P09327 827 aaKnown RBP11.52□□□□□ -0.56
LINC00346-201ENST00000538077 SPATA31D3P0C874 917 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 ERMARDQ5T6L9 678 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 SPATA31D4Q6ZUB0 917 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 REPS2Q8NFH8 660 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 PHF21BQ96EK2 531 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 ERP44Q9BS26 406 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 DDX4Q9NQI0 724 aaKnown RBP11.52□□□□□ -0.56
LINC00346-201ENST00000538077 PPP2R3BQ9Y5P8 575 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 TNS2Q63HR2 1409 aa11.52□□□□□ -0.56
LINC00346-201ENST00000538077 DLC1Q96QB1 1528 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 NDUFS2O75306 463 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 FAM107AO95990 144 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 CDH2P19022 906 aaPredicted RBP11.52□□□□□ -0.57
LINC00346-201ENST00000538077 SERPINB4P48594 390 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 TRIP4Q15650 581 aaPredicted RBP11.52□□□□□ -0.57
LINC00346-201ENST00000538077 BOLA3Q53S33 107 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 ADAM2Q99965 735 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 C17orf75Q9HAS0 396 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 ATP13A1Q9HD20 1204 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 NUDT14O95848 222 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 RRM1P23921 792 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 KRT20P35900 424 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 MAGEA9P43362 315 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 GMCL1Q96IK5 515 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 PNMA5Q96PV4 448 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 MKNK1Q9BUB5 465 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 SDR42E2A6NKP2 422 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 TRPC5OSA6NMA1 111 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 NCKAP1LP55160 1127 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 CBWD3Q5JTY5 395 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 CBWD5Q5RIA9 395 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 GPC2Q8N158 579 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC00346-201ENST00000538077 DNERQ8NFT8 737 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 XPO6Q96QU8 1125 aaKnown RBP11.52□□□□□ -0.57
LINC00346-201ENST00000538077 C10orf88Q9H8K7 445 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 KLC4Q9NSK0 619 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 KLF15Q9UIH9 416 aa11.52□□□□□ -0.57
LINC00346-201ENST00000538077 KLHL2O95198 593 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 KRT8P05787 483 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 SEMA3FQ13275 785 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 ALKBH2Q6NS38 261 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CCNI2Q6ZMN8 369 aaPredicted RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 GLT6D1Q7Z4J2 308 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 ARID3BQ8IVW6 561 aaPredicted RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 BBS7Q8IWZ6 715 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 GPAMQ9HCL2 828 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms