RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 GIPC2Q8TF65 315 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 RNF139Q8WU17 664 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 EDEM1Q92611 657 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 MYRFLQ96LU7 910 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 PEBP4Q96S96 227 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 PBX4Q9BYU1 374 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 SMOC2Q9H3U7 446 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 FAM204AQ9H8W3 233 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 OLA1Q9NTK5 396 aaKnown RBP12.87□□□□□ -0.35
DDB1-209ENST00000537877 GMIPQ9P107 970 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 PCSK1NQ9UHG2 260 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 ASB3Q9Y575 518 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 GOLGA6L10A0A0M3HER8 536 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 LRRD1A4D1F6 860 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 ZNF487B1APH4 448 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 H0YGN5 161 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 CCDC188H7C350 402 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 GRM6O15303 877 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 TGM5O43548 720 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 GLUD1P00367 558 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 IGLV3-25P01717 112 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 ZDHHC11BP0C7U3 371 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 RARAP10276 462 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 RALAP11233 206 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 DNAJB1P25685 340 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 KLRC2P26717 231 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 GBP1P32455 592 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 GTF2F1P35269 517 aaKnown RBP eCLIP12.86□□□□□ -0.35
DDB1-209ENST00000537877 EPHB3P54753 998 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 PITX1P78337 314 aaPredicted RBP12.86□□□□□ -0.35
DDB1-209ENST00000537877 TAF10Q12962 218 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 GPM6BQ13491 265 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 MTMR3Q13615 1198 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 PDK2Q15119 407 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 LONRF2Q1L5Z9 754 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 SMTNL2Q2TAL5 461 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 RAB6CQ53S08 254 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 SCYL2Q6P3W7 929 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 SND1Q7KZF4 910 aaKnown RBP eCLIP12.86□□□□□ -0.359e-7■■□□□ 13.3
DDB1-209ENST00000537877 SPRED2Q7Z698 418 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 TAC4Q86UU9 113 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 ITIH5Q86UX2 942 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 SLC13A5Q86YT5 568 aaPredicted RBP12.86□□□□□ -0.35
DDB1-209ENST00000537877 ZNF276Q8N554 614 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 SPATA4Q8NEY3 305 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 CMASQ8NFW8 434 aaPredicted RBP12.86□□□□□ -0.35
DDB1-209ENST00000537877 DQX1Q8TE96 717 aaKnown RBP12.86□□□□□ -0.35
DDB1-209ENST00000537877 NTAN1Q96AB6 310 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 CDK5RAP1Q96SZ6 601 aaKnown RBP12.86□□□□□ -0.35
DDB1-209ENST00000537877 SNRNP25Q9BV90 132 aaKnown RBP12.86□□□□□ -0.35
DDB1-209ENST00000537877 ADAM33Q9BZ11 813 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 RAB6CQ9H0N0 254 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 LMAN2LQ9H0V9 348 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 NMUR1Q9HB89 426 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 DDIT4Q9NX09 232 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 SMARCAL1Q9NZC9 954 aa12.86□□□□□ -0.35
DDB1-209ENST00000537877 UXTQ9UBK9 157 aaPredicted RBP12.86□□□□□ -0.35
DDB1-209ENST00000537877 HIDE1A8MVS5 230 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 IRAK2O43187 625 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 HMGA1P17096 107 aaKnown RBP12.85□□□□□ -0.35
DDB1-209ENST00000537877 KDELR1P24390 212 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 PPP3CCP48454 512 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 TWF1Q12792 350 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 NNTQ13423 1086 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 TAF12Q16514 161 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 TAZQ16635 292 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 ATP13A4Q4VNC1 1196 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 TFDP3Q5H9I0 405 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 KCNT1Q5JUK3 1230 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 ERMARDQ5T6L9 678 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 SNX30Q5VWJ9 437 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 PPP2R2DQ66LE6 453 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 AADACL2Q6P093 401 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 MFSD7Q6UXD7 560 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 SPOCD1Q6ZMY3 1216 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 RSRC2Q7L4I2 434 aaKnown RBP12.85□□□□□ -0.35
DDB1-209ENST00000537877 FAM131BQ86XD5 332 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 MAP7D3Q8IWC1 876 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 KREMEN2Q8NCW0 462 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 RAPGEF5Q92565 580 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 HSPH1Q92598 858 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 PSMG2Q969U7 264 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 RNF25Q96BH1 459 aaPredicted RBP12.85□□□□□ -0.35
DDB1-209ENST00000537877 SERPINB11Q96P15 392 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 OSBPL8Q9BZF1 889 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 NKX2-4Q9H2Z4 354 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 WDR6Q9NNW5 1121 aaKnown RBP12.85□□□□□ -0.35
DDB1-209ENST00000537877 PIGVQ9NUD9 493 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDB1-209ENST00000537877 KLHL11Q9NVR0 708 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDB1-209ENST00000537877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDB1-209ENST00000537877 MAGED2Q9UNF1 606 aaPredicted RBP12.85□□□□□ -0.35
DDB1-209ENST00000537877 AP4E1Q9UPM8 1137 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 EFR3BQ9Y2G0 817 aa12.85□□□□□ -0.35
DDB1-209ENST00000537877 hCG_1818297A0A087WSY0 165 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 C3orf70A6NLC5 250 aaPredicted RBP12.84□□□□□ -0.35
DDB1-209ENST00000537877 PI4K2BG5E9Z4 385 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 KRIT1O00522 736 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms