RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 ORC1Q13415 861 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 PSMD6Q15008 389 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 CCDC157Q569K6 752 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 ZNF667Q5HYK9 610 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 SNX30Q5VWJ9 437 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 FAM173BQ6P4H8 233 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 HTR3DQ70Z44 454 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 ACOT1Q86TX2 421 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 SLCO6A1Q86UG4 719 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 NELFCDQ8IXH7 590 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 XXYLT1Q8NBI6 393 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 SLC2A14Q8TDB8 520 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 SNX19Q92543 992 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 TRIM9Q9C026 710 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 FBXO44Q9H4M3 255 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 GAREM1Q9H706 876 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 UPF2Q9HAU5 1272 aaKnown RBP8.49□□□□□ -1.05
CHFR-211ENST00000535897 TM7SF3Q9NS93 570 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 FAM49BQ9NUQ9 324 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 COMMD8Q9NX08 183 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 PLK2Q9NYY3 685 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 PCOLCE2Q9UKZ9 415 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 STON1Q9Y6Q2 735 aa8.49□□□□□ -1.05
CHFR-211ENST00000535897 GFRA2O00451 464 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 EIF3DO15371 548 aaKnown RBP eCLIP8.48□□□□□ -1.05
CHFR-211ENST00000535897 BCAT2O15382 392 aaPredicted RBP8.48□□□□□ -1.05
CHFR-211ENST00000535897 CYP26A1O43174 497 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 EXOC3O60645 756 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 STAU1O95793 577 aaKnown RBP8.48□□□□□ -1.05
CHFR-211ENST00000535897 ZDHHC11BP0C7U3 371 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 ACADMP11310 421 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 P4HA1P13674 534 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 ADORA2BP29275 332 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 HOXD13P35453 343 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 MATKP42679 507 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 CASP4P49662 377 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 PGFP49763 221 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 ARID5AQ03989 594 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 FUT11Q495W5 492 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 C8orf34Q49A92 452 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 FAM26FQ5R3K3 315 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 C10orf120Q5SQS8 335 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 DCAF12L1Q5VU92 463 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 IL27RAQ6UWB1 636 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 PAQR9Q6ZVX9 377 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 FAM124AQ86V42 546 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 FUKQ8N0W3 1084 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 RHBDD1Q8TEB9 315 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 UCMAQ8WVF2 138 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 PRCCQ92733 491 aaPredicted RBP8.48□□□□□ -1.05
CHFR-211ENST00000535897 ELMO3Q96BJ8 720 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 DUSP9Q99956 384 aaKnown RBP8.48□□□□□ -1.05
CHFR-211ENST00000535897 KLF16Q9BXK1 252 aaPredicted RBP8.48□□□□□ -1.05
CHFR-211ENST00000535897 XYLT2Q9H1B5 865 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 TNMDQ9H2S6 317 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 IL21RQ9HBE5 538 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 CD248Q9HCU0 757 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 MARK1Q9P0L2 795 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 EIF2B4Q9UI10 523 aaKnown RBP8.48□□□□□ -1.05
CHFR-211ENST00000535897 NUDT5Q9UKK9 219 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 SMG1Q96Q15 3661 aaKnown RBP8.48□□□□□ -1.05
CHFR-211ENST00000535897 PTPRBP23467 1997 aa8.48□□□□□ -1.05
CHFR-211ENST00000535897 BPTFQ12830 3046 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 PLXNB3Q9ULL4 1909 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 FAM92AA1XBS5 289 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 MDM4O15151 490 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 FLRT2O43155 660 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 TGFB1I1O43294 461 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 CBFA2T3O75081 653 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 CILPO75339 1184 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 BEST1O76090 585 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 KIF20AO95235 890 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 ATXN1LP0C7T5 689 aaKnown RBP8.47□□□□□ -1.05
CHFR-211ENST00000535897 FAM200BP0CF97 657 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 RARGP13631 454 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 ACO1P21399 889 aaKnown RBP8.47□□□□□ -1.05
CHFR-211ENST00000535897 OXTRP30559 389 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 TPMTP51580 245 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 AMPD3Q01432 767 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 NCOA4Q13772 614 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 STK38Q15208 465 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 HLA-BQ31612 363 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 GLRX5Q86SX6 157 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 CADM4Q8NFZ8 388 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 ZNF507Q8TCN5 953 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 DNASE2BQ8WZ79 361 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 ZNF516Q92618 1163 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 DHX58Q96C10 678 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 SIPA1Q96FS4 1042 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 CDC6Q99741 560 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 SMOQ99835 787 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 CIPCQ9C0C6 399 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 MKRN2Q9H000 416 aaKnown RBP8.47□□□□□ -1.05
CHFR-211ENST00000535897 CYLDQ9NQC7 956 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 ITM2CQ9NQX7 267 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 WSB2Q9NYS7 404 aaPredicted RBP8.47□□□□□ -1.05
CHFR-211ENST00000535897 IL37Q9NZH6 218 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 DNMT3LQ9UJW3 386 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 NAGPAQ9UK23 515 aa8.47□□□□□ -1.05
CHFR-211ENST00000535897 FNDC3AQ9Y2H6 1198 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms