RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.31□□□□□ -0.927e-8■■□□□ 13.8
CHD4-204ENST00000535810 TBC1D14Q9P2M4 693 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 RWDD2AQ9UIY3 292 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 SMG5Q9UPR3 1016 aaKnown RBP9.31□□□□□ -0.92
CHD4-204ENST00000535810 SH3BP1Q9Y3L3 701 aa9.31□□□□□ -0.92
CHD4-204ENST00000535810 ATG2BQ96BY7 2078 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 GOLGA6L22H0YM25 854 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 TULP2O00295 520 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 O00370 1275 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 MDM4O15151 490 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 ATG13O75143 517 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 IRF1P10914 325 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 ADH5P11766 374 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 RARGP13631 454 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 CD19P15391 556 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 ATP5C1P36542 298 aaKnown RBP9.3□□□□□ -0.92
CHD4-204ENST00000535810 FNTBP49356 437 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 BCAT1P54687 386 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 SLC8A3P57103 927 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 MESP2Q0VG99 397 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 CETN1Q12798 172 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 KCNH2Q12809 1159 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 SGO2Q562F6 1265 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 RAB41Q5JT25 222 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 LY6G5CQ5SRR4 150 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 HEATR6Q6AI08 1181 aaKnown RBP9.3□□□□□ -0.92
CHD4-204ENST00000535810 TMEM270Q6UE05 265 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 LONP2Q86WA8 852 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 C12orf40Q86WS4 652 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 PPM1KQ8N3J5 372 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 RPLP0P6Q8NHW5 317 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 OTUB2Q96DC9 234 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 ZSWIM1Q9BR11 485 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 KLF16Q9BXK1 252 aaPredicted RBP9.3□□□□□ -0.92
CHD4-204ENST00000535810 UBXN6Q9BZV1 441 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 CLIC5Q9NZA1 410 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 NAGPAQ9UK23 515 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 NUDT5Q9UKK9 219 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 TSPAN16Q9UKR8 245 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHD4-204ENST00000535810 FAM208BQ5VWN6 2430 aa9.3□□□□□ -0.92
CHD4-204ENST00000535810 FASNP49327 2511 aaKnown RBP9.29□□□□□ -0.92
CHD4-204ENST00000535810 MYOFQ9NZM1 2061 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 K7EQS6 105 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 XPO1O14980 1071 aaKnown RBP9.29□□□□□ -0.92
CHD4-204ENST00000535810 FGFR1OPO95684 399 aaKnown RBP9.29□□□□□ -0.92
CHD4-204ENST00000535810 AFPP02771 609 aaKnown RBP9.29□□□□□ -0.92
CHD4-204ENST00000535810 PAEPP09466 180 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 CCDC192P0DO97 292 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 VDRP11473 427 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 EIF2DP41214 584 aaKnown RBP9.29□□□□□ -0.92
CHD4-204ENST00000535810 PLA2G4AP47712 749 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 TKTL1P51854 596 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 ZNF132P52740 706 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 GCNT1Q02742 428 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 PDE4CQ08493 712 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 BST2Q10589 180 aaKnown RBP9.29□□□□□ -0.92
CHD4-204ENST00000535810 COL9A2Q14055 689 aaPredicted RBP9.29□□□□□ -0.92
CHD4-204ENST00000535810 PKDCCQ504Y2 493 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 C10orf120Q5SQS8 335 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 CLEC17AQ6ZS10 378 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 HTR3DQ70Z44 454 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 RRAGAQ7L523 313 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 TADA2BQ86TJ2 420 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 ARHGEF19Q8IW93 802 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 SFTPA1Q8IWL2 248 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 ETFBKMTQ8IXQ9 262 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 ZNF276Q8N554 614 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 MLKLQ8NB16 471 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 TFAP2BQ92481 460 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 ACDQ96AP0 544 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 CNOT6LQ96LI5 555 aaKnown RBP9.29□□□□□ -0.92
CHD4-204ENST00000535810 INTS2Q9H0H0 1204 aaKnown RBP9.29□□□□□ -0.92
CHD4-204ENST00000535810 SPHK2Q9NRA0 654 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 POLR3BQ9NW08 1133 aaPredicted RBP9.29□□□□□ -0.92
CHD4-204ENST00000535810 HESX1Q9UBX0 185 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 DNMT3LQ9UJW3 386 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 KIAA1257Q9ULG3 409 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 PCDHB4Q9Y5E5 795 aa9.29□□□□□ -0.92
CHD4-204ENST00000535810 KIAA1549LQ6ZVL6 1849 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 SDK1Q7Z5N4 2213 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 ANTXRLA6NF34 631 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.28□□□□□ -0.92
CHD4-204ENST00000535810 BHMG1C9JSJ3 638 aaPredicted RBP9.28□□□□□ -0.92
CHD4-204ENST00000535810 RNF225M0QZC1 329 aaPredicted RBP9.28□□□□□ -0.92
CHD4-204ENST00000535810 HOXC11O43248 304 aaPredicted RBP9.28□□□□□ -0.92
CHD4-204ENST00000535810 HRO43593 1189 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 KAT7O95251 611 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 ZBED1O96006 694 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 SETSIPP0DME0 302 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 RALAP11233 206 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 SLC6A11P48066 632 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 PXNP49023 591 aaPredicted RBP9.28□□□□□ -0.92
CHD4-204ENST00000535810 ATXN1P54253 815 aaKnown RBP9.28□□□□□ -0.92
CHD4-204ENST00000535810 SEC13P55735 322 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 GAD2Q05329 585 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 KDSRQ06136 332 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 GOLGA8FQ08AF8 430 aa9.28□□□□□ -0.92
CHD4-204ENST00000535810 GOLGA8DPQ0D2H9 430 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms