RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 NACA2Q9H009 215 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 EPC1Q9H2F5 836 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 UBE2TQ9NPD8 197 aaPredicted RBP17.2■□□□□ 0.34
ATL3-202ENST00000535789 TBC1D14Q9P2M4 693 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 CYTH4Q9UIA0 394 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 RASAL2Q9UJF2 1139 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 HCN2Q9UL51 889 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 THADAQ6YHU6 1953 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 SDK1Q7Z5N4 2213 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 HOXC11O43248 304 aaPredicted RBP17.19■□□□□ 0.34
ATL3-202ENST00000535789 LMNAP02545 664 aaKnown RBP17.19■□□□□ 0.34
ATL3-202ENST00000535789 HNRNPLP14866 589 aaKnown RBP eCLIP17.19■□□□□ 0.34
ATL3-202ENST00000535789 DAOAP59103 153 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 EFEMP1Q12805 493 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 CNGA2Q16280 664 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 STX1AQ16623 288 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 MAN2A1Q16706 1144 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 C11orf57Q6ZUT1 292 aaPredicted RBP17.19■□□□□ 0.34
ATL3-202ENST00000535789 OTUB2Q96DC9 234 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 SPHK2Q9NRA0 654 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 HESX1Q9UBX0 185 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 APEX2Q9UBZ4 518 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 DNMT3LQ9UJW3 386 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 KIAA1257Q9ULG3 409 aa17.19■□□□□ 0.34
ATL3-202ENST00000535789 ABCA7Q8IZY2 2146 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 CEP250Q9BV73 2442 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 GTPBP10A4D1E9 387 aaKnown RBP17.18■□□□□ 0.34
ATL3-202ENST00000535789 ADH1CP00326 375 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 PNMA6AP0CW24 399 aaPredicted RBP17.18■□□□□ 0.34
ATL3-202ENST00000535789 LCP1P13796 627 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 MTIF2P46199 727 aaKnown RBP17.18■□□□□ 0.34
ATL3-202ENST00000535789 PXNP49023 591 aaPredicted RBP17.18■□□□□ 0.34
ATL3-202ENST00000535789 RPL34P49207 117 aaKnown RBP17.18■□□□□ 0.34
ATL3-202ENST00000535789 SEC13P55735 322 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 AMPD2Q01433 879 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 KCNMA1Q12791 1236 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 NR1H3Q13133 447 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 HEATR6Q6AI08 1181 aaKnown RBP17.18■□□□□ 0.34
ATL3-202ENST00000535789 DENND1BQ6P3S1 775 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 SCML4Q8N228 414 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 NAT16Q8N8M0 369 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 USP33Q8TEY7 942 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 FAM126AQ9BYI3 521 aaPredicted RBP17.18■□□□□ 0.34
ATL3-202ENST00000535789 SEMA4AQ9H3S1 761 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 ZDHHC4Q9NPG8 344 aa17.18■□□□□ 0.34
ATL3-202ENST00000535789 HRO43593 1189 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 TULP3O75386 442 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 HMBSP08397 361 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 RALAP11233 206 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 KRT5P13647 590 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 EIF2DP41214 584 aaKnown RBP17.17■□□□□ 0.34
ATL3-202ENST00000535789 GPD2P43304 727 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 ARHGAP44Q17R89 818 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 EXOC3L4Q17RC7 722 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 FBXO43Q4G163 708 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 GBP6Q6ZN66 633 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 GAS2L3Q86XJ1 694 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 DCLK2Q8N568 766 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 SHC3Q92529 594 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 EDEM1Q92611 657 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 HHIPQ96QV1 700 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 NDST4Q9H3R1 872 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 TSPY26PQ9H489 355 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 LRRC4Q9HBW1 653 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 ANO10Q9NW15 660 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 MARK1Q9P0L2 795 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 TJP2Q9UDY2 1190 aa17.17■□□□□ 0.34
ATL3-202ENST00000535789 SMG5Q9UPR3 1016 aaKnown RBP17.17■□□□□ 0.34
ATL3-202ENST00000535789 KCNJ18B7U540 433 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 MSI1O43347 362 aaKnown RBP17.16■□□□□ 0.34
ATL3-202ENST00000535789 KAT7O95251 611 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 FYNP06241 537 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 HOXA6P31267 233 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 KIR2DL1P43626 348 aaPredicted RBP17.16■□□□□ 0.34
ATL3-202ENST00000535789 SLC8A3P57103 927 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 GAD2Q05329 585 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 KCNJ12Q14500 433 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 STILQ15468 1287 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 ANO6Q4KMQ2 910 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 VWA3BQ502W6 1294 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 EMC10Q5UCC4 262 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 CDKAL1Q5VV42 579 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 BSPRYQ5W0U4 402 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 SIX6OS1Q8N1H7 587 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 ATRIPQ8WXE1 791 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 PIWIL1Q96J94 861 aaKnown RBP17.16■□□□□ 0.34
ATL3-202ENST00000535789 PNKPQ96T60 521 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 TUBGCP2Q9BSJ2 902 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 CNGB3Q9NQW8 809 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 MARCH2Q9P0N8 246 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 SFMBT1Q9UHJ3 866 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 NFE2L3Q9Y4A8 694 aa17.16■□□□□ 0.34
ATL3-202ENST00000535789 A0A0A0MRY4 1105 aa17.15■□□□□ 0.34
ATL3-202ENST00000535789 NEDD8-MDP1E9PL57 170 aa17.15■□□□□ 0.34
ATL3-202ENST00000535789 CACNG3O60359 315 aa17.15■□□□□ 0.34
ATL3-202ENST00000535789 GNA15P30679 374 aa17.15■□□□□ 0.34
ATL3-202ENST00000535789 CORO1AP31146 461 aaKnown RBP17.15■□□□□ 0.34
ATL3-202ENST00000535789 DMC1Q14565 340 aa17.15■□□□□ 0.34
ATL3-202ENST00000535789 LPAL2Q16609 132 aa17.15■□□□□ 0.34
ATL3-202ENST00000535789 TPD52L1Q16890 204 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms