RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SPAG17Q6Q759 2223 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 ANK1P16157 1881 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 MYH11P35749 1972 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 FAM149AA5PLN7 773 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 KCNJ18B7U540 433 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 BCAT2O15382 392 aaPredicted RBP13.75□□□□□ -0.21
COPB1-209ENST00000533096 CACNG3O60359 315 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 SYNCRIPO60506 623 aaKnown RBP13.75□□□□□ -0.21
COPB1-209ENST00000533096 GREM1O60565 184 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 ATXN1LP0C7T5 689 aaKnown RBP13.75□□□□□ -0.21
COPB1-209ENST00000533096 RARGP13631 454 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 ACO1P21399 889 aaKnown RBP13.75□□□□□ -0.21
COPB1-209ENST00000533096 PLA2G4AP47712 749 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 TUBP50607 506 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 AMPD3Q01432 767 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 SLC39A14Q15043 492 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 DCAF12L1Q5VU92 463 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 ZMIZ2Q8NF64 920 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 SNX19Q92543 992 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 SIPA1Q96FS4 1042 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 ZDHHC5Q9C0B5 715 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 MKRN2Q9H000 416 aaKnown RBP13.75□□□□□ -0.21
COPB1-209ENST00000533096 FBXO44Q9H4M3 255 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 CD248Q9HCU0 757 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 SLC39A2Q9NP94 309 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 OSER1Q9NX31 292 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 TFIP11Q9UBB9 837 aaKnown RBP13.75□□□□□ -0.21
COPB1-209ENST00000533096 PCOLCE2Q9UKZ9 415 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 LAMA1P25391 3075 aa13.75□□□□□ -0.21
COPB1-209ENST00000533096 IGF2RP11717 2491 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 A0A1B0GVT2 93 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 A0A1W2PQH9 124 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 TRABD2BA6NFA1 517 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 CYP26A1O43174 497 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 CILPO75339 1184 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 ACADMP11310 421 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 PDCP20941 246 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 CASP1P29466 404 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 MATKP42679 507 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 CSNK1EP49674 416 aaKnown RBP13.74□□□□□ -0.21
COPB1-209ENST00000533096 TPMTP51580 245 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 NDST1P52848 882 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 NCOA4Q13772 614 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 STK38Q15208 465 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 FAM26FQ5R3K3 315 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 GPRIN1Q7Z2K8 1008 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 DNASE2BQ8WZ79 361 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 PRCCQ92733 491 aaPredicted RBP13.74□□□□□ -0.21
COPB1-209ENST00000533096 GZF1Q9H116 711 aaPredicted RBP13.74□□□□□ -0.21
COPB1-209ENST00000533096 BLZF1Q9H2G9 400 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 NMUR1Q9HB89 426 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 DNMT3LQ9UJW3 386 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 NAGPAQ9UK23 515 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.74□□□□□ -0.21
COPB1-209ENST00000533096 FAM208BQ5VWN6 2430 aa13.74□□□□□ -0.21
COPB1-209ENST00000533096 ZNF638Q14966 1978 aaKnown RBP13.74□□□□□ -0.21
COPB1-209ENST00000533096 METTL12A8MUP2 240 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 GFRA2O00451 464 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 EIF3DO15371 548 aaKnown RBP eCLIP13.73□□□□□ -0.21
COPB1-209ENST00000533096 CBFA2T3O75081 653 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 STAU1O95793 577 aaKnown RBP13.73□□□□□ -0.21
COPB1-209ENST00000533096 SYT1P21579 422 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 OXTRP30559 389 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 IL12RB1P42701 662 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 GEN1Q17RS7 908 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 EPM2AIP1Q7L775 607 aaPredicted RBP13.73□□□□□ -0.21
COPB1-209ENST00000533096 PLEKHO2Q8TD55 490 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 SORCS1Q8WY21 1168 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 DCBLD2Q96PD2 775 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 BBC3Q96PG8 261 aaPredicted RBP13.73□□□□□ -0.21
COPB1-209ENST00000533096 NUP58Q9BVL2 599 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 CIPCQ9C0C6 399 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 UPF2Q9HAU5 1272 aaKnown RBP13.73□□□□□ -0.21
COPB1-209ENST00000533096 MARK1Q9P0L2 795 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 HMGXB4Q9UGU5 601 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 FNDC3AQ9Y2H6 1198 aaKnown RBP13.73□□□□□ -0.21
COPB1-209ENST00000533096 AKAP13Q12802 2813 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 SPEGQ15772 3267 aa13.73□□□□□ -0.21
COPB1-209ENST00000533096 ZZEF1O43149 2961 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 FAM92AA1XBS5 289 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 KLKB1P03952 638 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 C4BPAP04003 597 aaKnown RBP13.72□□□□□ -0.21
COPB1-209ENST00000533096 FAM200BP0CF97 657 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 P4HA1P13674 534 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 BNC1Q01954 994 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 ARID5AQ03989 594 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 SUZ12Q15022 739 aaKnown RBP13.72□□□□□ -0.21
COPB1-209ENST00000533096 SGSM1Q2NKQ1 1148 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 SPOPLQ6IQ16 392 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 TMPRSS7Q7RTY8 843 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 CRYBG2Q8N1P7 616 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 CADM4Q8NFZ8 388 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 UCMAQ8WVF2 138 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 CYFIP2Q96F07 1278 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 P2RY11Q96G91 374 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 CRELD1Q96HD1 420 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 CDC6Q99741 560 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 TNMDQ9H2S6 317 aa13.72□□□□□ -0.21
COPB1-209ENST00000533096 KBTBD4Q9NVX7 518 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms