RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 TMCO5BA8MYB1 307 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 DDX3XO00571 662 aaKnown RBP eCLIP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 NRG2O14511 850 aaPredicted RBP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 SLC9A3R1O14745 358 aaPredicted RBP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 DAB1O75553 588 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 GABBR2O75899 941 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 FCARP24071 287 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 GBP1P32455 592 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 GSCP56915 257 aaPredicted RBP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 TDGQ13569 410 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 GSE1Q14687 1217 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 SLC18A3Q16572 532 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 ARHGAP29Q52LW3 1261 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 DCAF6Q58WW2 860 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 TANGO2Q6ICL3 276 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 MSANTD2Q6P1R3 559 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 ALKBH5Q6P6C2 394 aaKnown RBP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 WDR59Q6PJI9 974 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 BHLHA9Q7RTU4 235 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 RNF135Q8IUD6 432 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 MFSD6LQ8IWD5 586 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 MCOLN2Q8IZK6 566 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 C3orf20Q8ND61 904 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 SH3RF2Q8TEC5 729 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 NDRG1Q92597 394 aaKnown RBP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 SLC22A12Q96S37 553 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 SELENOOQ9BVL4 669 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 TRMT61BQ9BVS5 477 aaKnown RBP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 DCLK3Q9C098 648 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 SMG9Q9H0W8 520 aaKnown RBP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 SMOC2Q9H3U7 446 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 FAM204AQ9H8W3 233 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 OSER1Q9NX31 292 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 SMPD4Q9NXE4 827 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 TJP2Q9UDY2 1190 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 HBS1LQ9Y450 684 aaKnown RBP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 PAXBP1Q9Y5B6 917 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 MUC3AQ02505 3323 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 HELZP42694 1942 aaKnown RBP12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 ANAPC1Q9H1A4 1944 aa12.37□□□□□ -0.43
PPFIA1-220ENST00000532024 A0A087X0T9 212 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 LEFTY2O00292 366 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 ZNF263O14978 683 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 TBX18O95935 607 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 FTLP02792 175 aaPredicted RBP12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 PLEKP08567 350 aaPredicted RBP12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 FAM228BP0C875 321 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 KRT3P12035 628 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 NOS2P35228 1153 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 CYLC1P35663 651 aaPredicted RBP12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 VIPR2P41587 438 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 MATKP42679 507 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 IFNAR2P48551 515 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 HARS2P49590 506 aaKnown RBP12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 PGFP49763 221 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 RNASE9P60153 205 aaKnown RBP12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 PFKPQ01813 784 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 USP4Q13107 963 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 MTA1Q13330 715 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 NNTQ13423 1086 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 MTF1Q14872 753 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 CCDC122Q5T0U0 273 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 DCUN1D2Q6PH85 259 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 HFE2Q6ZVN8 426 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 SND1Q7KZF4 910 aaKnown RBP eCLIP12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 ARCQ7LC44 396 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 TMTC1Q8IUR5 882 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 UBALD2Q8IYN6 164 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 CCDC170Q8IYT3 715 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 IRF7Q92985 503 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 PLD4Q96BZ4 506 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 ZNF653Q96CK0 615 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 SLC2A13Q96QE2 648 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 RNF38Q9H0F5 515 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 ISCUQ9H1K1 167 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 BRD9Q9H8M2 597 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 NHEJ1Q9H9Q4 299 aaPredicted RBP12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 MRPL47Q9HD33 250 aaKnown RBP12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 METTL5Q9NRN9 209 aaKnown RBP12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 PARVAQ9NVD7 372 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 CFAP97Q9P2B7 532 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 TBC1D14Q9P2M4 693 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 NUDT5Q9UKK9 219 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 CCL26Q9Y258 94 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 ZNF510Q9Y2H8 683 aa12.36□□□□□ -0.43
PPFIA1-220ENST00000532024 SLC12A8A0AV02 714 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 E2F8A0AVK6 867 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 FAM170AA1A519 330 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 CHADO15335 359 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 GRAP2O75791 330 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 ASGR2P07307 311 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 IRF1P10914 325 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 SLC2A3P11169 496 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 SRFP11831 508 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 COL9A1P20849 921 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 SDC4P31431 198 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 FCHO2Q0JRZ9 810 aa12.35□□□□□ -0.43
PPFIA1-220ENST00000532024 PDGFRLQ15198 375 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms