RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 FASTKD3Q14CZ7 662 aaKnown RBP8.4□□□□□ -1.06
CSDE1-214ENST00000530886 PDK1Q15118 436 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 MDH1BQ5I0G3 518 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 IRAK1BP1Q5VVH5 260 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 ARCQ7LC44 396 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 HPS6Q86YV9 775 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 DCP2Q8IU60 420 aaKnown RBP8.4□□□□□ -1.06
CSDE1-214ENST00000530886 CRLF3Q8IUI8 442 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 SEPT12Q8IYM1 358 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 CACTIN-AS1Q8N1I8 211 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 RNF169Q8NCN4 708 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 FBXL18Q96ME1 805 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 GPR101Q96P66 508 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-214ENST00000530886 ZNF347Q96SE7 839 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 FIZ1Q96SL8 496 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 SLC39A3Q9BRY0 314 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 RTKNQ9BST9 563 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 NUP85Q9BW27 656 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 NYXQ9GZU5 481 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 INTS2Q9H0H0 1204 aaKnown RBP8.4□□□□□ -1.06
CSDE1-214ENST00000530886 FKBP14Q9NWM8 211 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 CORINQ9Y5Q5 1042 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 WDR81Q562E7 1941 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 FKBP9O95302 570 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 PROCP04070 461 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 ERBB2P04626 1255 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 TGM1P22735 817 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 BST1Q10588 318 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 SLC30A10Q6XR72 485 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 IGFN1Q86VF2 1251 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 GALNT13Q8IUC8 556 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 LILRA2Q8N149 483 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 PDZD8Q8NEN9 1154 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 TMEM174Q8WUU8 243 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 HPS1Q92902 700 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 SLC5A5Q92911 643 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 MBOAT7Q96N66 472 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 WDR83Q9BRX9 315 aaKnown RBP8.4□□□□□ -1.06
CSDE1-214ENST00000530886 NPLQ9BXD5 320 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-214ENST00000530886 FRMD8Q9BZ67 464 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-214ENST00000530886 MAGEE1Q9HCI5 957 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 FBXO9Q9UK97 447 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-214ENST00000530886 COL5A2P05997 1499 aaPredicted RBP8.4□□□□□ -1.07
CSDE1-214ENST00000530886 ZNF831Q5JPB2 1677 aa8.4□□□□□ -1.07
CSDE1-214ENST00000530886 FAM172BPA6NC97 362 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 GUCY1B2O75343 617 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 BBOX1O75936 387 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 SORBS2O94875 1100 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 MT-ND3P03897 115 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 YBX3P16989 372 aaKnown RBP eCLIP8.39□□□□□ -1.079e-10■■□□□ 13.4
CSDE1-214ENST00000530886 THOP1P52888 689 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 EPHB1P54762 984 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 C19orf57Q0VDD7 668 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 EIF2B5Q13144 721 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 CAVIN4Q5BKX8 364 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 HEATR3Q7Z4Q2 680 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ARID3BQ8IVW6 561 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 TNIP2Q8NFZ5 429 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 SUN5Q8TC36 379 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ACDQ96AP0 544 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 E2F7Q96AV8 911 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 TXNDC15Q96J42 360 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 FAM111AQ96PZ2 611 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 PCDHB18PQ96TA0 734 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 RIOX1Q9H6W3 641 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 VRTNQ9H8Y1 702 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 SLC38A10Q9HBR0 1119 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 DNAJC28Q9NX36 388 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 IPO11Q9UI26 975 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 POU2F3Q9UKI9 436 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 NIP7Q9Y221 180 aaKnown RBP eCLIP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 DRG1Q9Y295 367 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 MSI1O43347 362 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 JRKO75564 520 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 TRPA1O75762 1119 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 PLA2G4BP0C869 781 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 FDX1P10109 184 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 RFC4P35249 363 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 TMBIM6P55061 237 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 TFAP4Q01664 338 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 PTK2BQ14289 1009 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 CHRNA2Q15822 529 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 CBWD6Q4V339 395 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 CBWD3Q5JTY5 395 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 CBWD5Q5RIA9 395 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 RFPL4BQ6ZWI9 263 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 PCGF5Q86SE9 256 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 TPH2Q8IWU9 490 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 DEFB107AQ8IZN7 70 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 GIMAP1Q8WWP7 306 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ATP2A3Q93084 1043 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 WRNIP1Q96S55 665 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 SERPINI1Q99574 410 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 TRIM56Q9BRZ2 755 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ZFYVE28Q9HCC9 887 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 NOCTQ9UK39 431 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 APOBEC2Q9Y235 224 aaKnown RBP8.39□□□□□ -1.07
CSDE1-214ENST00000530886 A0A1W2PQ67 120 aa8.39□□□□□ -1.07
CSDE1-214ENST00000530886 ARHGEF37A1IGU5 675 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms