RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 ADGRA1Q86SQ6 560 aa8.75□□□□□ -1.01
CTNND1-219ENST00000528621 LRRC34Q8IZ02 419 aa8.75□□□□□ -1.01
CTNND1-219ENST00000528621 KIF2BQ8N4N8 673 aa8.75□□□□□ -1.01
CTNND1-219ENST00000528621 LZTR1Q8N653 840 aa8.75□□□□□ -1.01
CTNND1-219ENST00000528621 TDRD5Q8NAT2 981 aaKnown RBP8.75□□□□□ -1.01
CTNND1-219ENST00000528621 NOA1Q8NC60 698 aaKnown RBP8.75□□□□□ -1.01
CTNND1-219ENST00000528621 ATG4AQ8WYN0 398 aa8.75□□□□□ -1.01
CTNND1-219ENST00000528621 TSEN34Q9BSV6 310 aaKnown RBP8.75□□□□□ -1.01
CTNND1-219ENST00000528621 COPS7BQ9H9Q2 264 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-219ENST00000528621 FRMPD4Q14CM0 1322 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 CNTNAP2Q9UHC6 1331 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 STRNO43815 780 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 GHRP10912 638 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 PTENP60484 403 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 GCNT1Q02742 428 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 PTPN11Q06124 597 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-219ENST00000528621 SCARA3Q6AZY7 606 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 MDM1Q8TC05 714 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 TSPAN18Q96SJ8 248 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 ASB7Q9H672 318 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 CISHQ9NSE2 258 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 SHOC2Q9UQ13 582 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 SLC12A8A0AV02 714 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 MICAL2O94851 1124 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 PCNAP12004 261 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 CRABP2P29373 138 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 RHOAP61586 193 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 PKN2Q16513 984 aaKnown RBP8.74□□□□□ -1.01
CTNND1-219ENST00000528621 ZNF284Q2VY69 593 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 KCNT1Q5JUK3 1230 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 C9orf131Q5VYM1 1079 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 SEL1L3Q68CR1 1132 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 IYDQ6PHW0 289 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 OTOAQ7RTW8 1153 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 STRA8Q7Z7C7 330 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 CCDC60Q8IWA6 550 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-219ENST00000528621 UROC1Q96N76 676 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 PAFAH2Q99487 392 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 CPNE1Q99829 537 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 DCLK3Q9C098 648 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 AVENQ9NQS1 362 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-219ENST00000528621 C6orf203Q9P0P8 240 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-219ENST00000528621 A0A087X0T9 212 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 DDHD2O94830 711 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 FAM228BP0C875 321 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 PYGMP11217 842 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 NQO1P15559 274 aaKnown RBP8.74□□□□□ -1.01
CTNND1-219ENST00000528621 PRIM2P49643 509 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 NFE2Q16621 373 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-219ENST00000528621 LY6KQ17RY6 165 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 TRIM60Q495X7 471 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 DENND1BQ6P3S1 775 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 ZPBP2Q6X784 338 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 PLEKHM3Q6ZWE6 761 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 MCOLN2Q8IZK6 566 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 SOCS4Q8WXH5 440 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 CCT7Q99832 543 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 SNTG2Q9NY99 539 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 F8W810 466 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 TRIM66O15016 1216 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 ERFP50548 548 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 TKTL1P51854 596 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 CORO7P57737 925 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 NAA20P61599 178 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 PCBP1Q15365 356 aaKnown RBP eCLIP8.74□□□□□ -1.014e-9■■■□□ 19
CTNND1-219ENST00000528621 FKBP1CQ5VVH2 108 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 BNC2Q6ZN30 1099 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-219ENST00000528621 ZNF571Q7Z3V5 609 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-219ENST00000528621 DIS3LQ8TF46 1054 aaKnown RBP8.74□□□□□ -1.01
CTNND1-219ENST00000528621 OSCP1Q8WVF1 389 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 SHCBP1LQ9BZQ2 653 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 CLPBQ9H078 707 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 RPS6KB2Q9UBS0 482 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 V9GYQ6 96 aa8.74□□□□□ -1.01
CTNND1-219ENST00000528621 SUPT7LO94864 414 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 MGAT5Q09328 741 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 MFSD10Q14728 455 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 NTRK3Q16288 839 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 CYP51A1Q16850 503 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 FBXO47Q5MNV8 452 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 ZNF438Q7Z4V0 828 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 P3H2Q8IVL5 708 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 COLGALT1Q8NBJ5 622 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 TUBGCP3Q96CW5 907 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 SMARCD1Q96GM5 515 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 ASB2Q96Q27 587 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 PNKPQ96T60 521 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 PDCD2LQ9BRP1 358 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 PRRG3Q9BZD7 231 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 TMEM134Q9H6X4 195 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 ZC4H2Q9NQZ6 224 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 DDX43Q9NXZ2 648 aaKnown RBP8.73□□□□□ -1.01
CTNND1-219ENST00000528621 UXTQ9UBK9 157 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-219ENST00000528621 STK39Q9UEW8 545 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 SLIT3O75094 1523 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 MROH1Q8NDA8 1641 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 A0A087WZ62 844 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 A0A087X1B8 175 aa8.73□□□□□ -1.01
CTNND1-219ENST00000528621 PRR23D1E9PI22 279 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms