RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CTHRC1Q96CG8 243 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 C18orf8Q96DM3 657 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 THAP7Q9BT49 309 aaPredicted RBP6.78□□□□□ -1.32
PCF11-202ENST00000528336 FBXO9Q9UK97 447 aaPredicted RBP6.78□□□□□ -1.32
PCF11-202ENST00000528336 SLC39A10Q9ULF5 831 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 ASAP1Q9ULH1 1129 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 PRDM2Q13029 1718 aa6.78□□□□□ -1.32
PCF11-202ENST00000528336 KIF21AQ7Z4S6 1674 aa6.77□□□□□ -1.32
PCF11-202ENST00000528336 HNRNPDLO14979 420 aaKnown RBP6.77□□□□□ -1.33
PCF11-202ENST00000528336 ZSCAN9O15535 394 aaPredicted RBP6.77□□□□□ -1.33
PCF11-202ENST00000528336 PLA2G6O60733 806 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 LDHAP00338 332 aaKnown RBP6.77□□□□□ -1.33
PCF11-202ENST00000528336 TMEM225BP0DP42 221 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 MYCLP12524 364 aaPredicted RBP6.77□□□□□ -1.33
PCF11-202ENST00000528336 MCCP23508 829 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 MST1P26927 711 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 HTR3AP46098 478 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 EIF4A1P60842 406 aaKnown RBP6.77□□□□□ -1.33
PCF11-202ENST00000528336 OS9Q13438 667 aaPredicted RBP6.77□□□□□ -1.33
PCF11-202ENST00000528336 TMEM119Q4V9L6 283 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 KIRREL2Q6UWL6 708 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 TERB1Q8NA31 727 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 VPS37AQ8NEZ2 397 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 CYP2W1Q8TAV3 490 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 GRAMD1AQ96CP6 724 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 REPS1Q96D71 796 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 DAZAP1Q96EP5 407 aaKnown RBP6.77□□□□□ -1.33
PCF11-202ENST00000528336 CRAMP1Q96RY5 1269 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 TRIM36Q9NQ86 728 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 TFCP2L1Q9NZI6 479 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 LRCH1Q9Y2L9 728 aa6.77□□□□□ -1.33
PCF11-202ENST00000528336 THOC2Q8NI27 1593 aaKnown RBP6.77□□□□□ -1.33
PCF11-202ENST00000528336 SRGAP2BP0DMP2 458 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 EGR1P18146 543 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 MCM5P33992 734 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 HTR7P34969 479 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 DIO1P49895 249 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 COPB1P53618 953 aaKnown RBP6.76□□□□□ -1.33
PCF11-202ENST00000528336 NANOS3P60323 173 aaKnown RBP6.76□□□□□ -1.33
PCF11-202ENST00000528336 HOXA4Q00056 320 aaPredicted RBP6.76□□□□□ -1.33
PCF11-202ENST00000528336 DEUP1Q05D60 604 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 POU5F1BQ06416 359 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 STARD3Q14849 445 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 MAPKAPK3Q16644 382 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 ST3GAL2Q16842 350 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 TMTC4Q5T4D3 741 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 TRIM72Q6ZMU5 477 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 P3H2Q8IVL5 708 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 SFTPA1Q8IWL2 248 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 SUN3Q8TAQ9 357 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 IPO4Q8TEX9 1081 aaKnown RBP6.76□□□□□ -1.33
PCF11-202ENST00000528336 VPS50Q96JG6 964 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 MMS19Q96T76 1030 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 SNX15Q9NRS6 342 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 SERGEFQ9UGK8 458 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 TAGLN3Q9UI15 199 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 WDR62O43379 1518 aa6.76□□□□□ -1.33
PCF11-202ENST00000528336 CUX2O14529 1486 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 COL15A1P39059 1388 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 M0R3H8 397 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 SUV39H1O43463 412 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 CA12O43570 354 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 PBX1P40424 430 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 LMAN2Q12907 356 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 CLCA4Q14CN2 919 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 RAB30Q15771 203 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 SLC5A9Q2M3M2 681 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 WDR78Q5VTH9 848 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 SUMO4Q6EEV6 95 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 GRHL2Q6ISB3 625 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 NGDNQ8NEJ9 315 aaKnown RBP6.75□□□□□ -1.33
PCF11-202ENST00000528336 NELL1Q92832 810 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 PKNOX2Q96KN3 472 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 TTLL2Q9BWV7 592 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 STK33Q9BYT3 514 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 TM7SF3Q9NS93 570 aa6.75□□□□□ -1.33
PCF11-202ENST00000528336 MAGED2Q9UNF1 606 aaPredicted RBP6.75□□□□□ -1.33
PCF11-202ENST00000528336 ABHD14A-ACY1A0A1B0GW23 586 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 A8MVJ9 347 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 ADAMTS3O15072 1205 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 TMPRSS11DO60235 418 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 PPFIA2O75334 1257 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 WDR47O94967 919 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 IL6STP40189 918 aaPredicted RBP6.74□□□□□ -1.33
PCF11-202ENST00000528336 MTAPQ13126 283 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 ATP1A4Q13733 1029 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 DENND2CQ68D51 928 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 FCRLBQ6BAA4 426 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 SERPINA13PQ6UXR4 307 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 KRT73Q86Y46 540 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 SPICE1Q8N0Z3 855 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 TMEM41AQ96HV5 264 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 USP29Q9HBJ7 922 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 PLCB1Q9NQ66 1216 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 COX11Q9Y6N1 276 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 URB2Q14146 1524 aaKnown RBP6.74□□□□□ -1.33
PCF11-202ENST00000528336 ABCC8Q09428 1581 aa6.74□□□□□ -1.33
PCF11-202ENST00000528336 PIP5K1BO14986 540 aa6.73□□□□□ -1.33
PCF11-202ENST00000528336 PROP1O75360 226 aa6.73□□□□□ -1.33
PCF11-202ENST00000528336 VIPP01282 170 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms