RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 DCLK3Q9C098 648 aa34.65■■■■□ 3.14
SSSCA1-205ENST00000527920 UBE2TQ9NPD8 197 aaPredicted RBP34.65■■■■□ 3.14
SSSCA1-205ENST00000527920 RAB23Q9ULC3 237 aa34.65■■■■□ 3.14
SSSCA1-205ENST00000527920 WDR87Q6ZQQ6 2873 aa34.65■■■■□ 3.14
SSSCA1-205ENST00000527920 HRO43593 1189 aa34.64■■■■□ 3.14
SSSCA1-205ENST00000527920 TNFRSF4P43489 277 aa34.64■■■■□ 3.14
SSSCA1-205ENST00000527920 EFEMP1Q12805 493 aa34.64■■■■□ 3.14
SSSCA1-205ENST00000527920 DMC1Q14565 340 aa34.64■■■■□ 3.14
SSSCA1-205ENST00000527920 HEATR6Q6AI08 1181 aaKnown RBP34.64■■■■□ 3.14
SSSCA1-205ENST00000527920 GBP6Q6ZN66 633 aa34.64■■■■□ 3.14
SSSCA1-205ENST00000527920 RSRC2Q7L4I2 434 aaKnown RBP34.64■■■■□ 3.14
SSSCA1-205ENST00000527920 MARCH2Q9P0N8 246 aa34.64■■■■□ 3.14
SSSCA1-205ENST00000527920 WDR35Q9P2L0 1181 aa34.64■■■■□ 3.14
SSSCA1-205ENST00000527920 RASAL2Q9UJF2 1139 aa34.64■■■■□ 3.14
SSSCA1-205ENST00000527920 M0QYV0 167 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 TULP3O75386 442 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 CHRM1P11229 460 aaPredicted RBP34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 MTIF2P46199 727 aaKnown RBP34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 MFAP3P55082 362 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 MESP2Q0VG99 397 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 EXOC3L4Q17RC7 722 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 ANO4Q32M45 955 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 CREBRFQ8IUR6 639 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 HINFPQ9BQA5 517 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 CRACR2AQ9BSW2 395 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 DEC1Q9P2X7 70 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 NCDNQ9UBB6 729 aa34.63■■■■□ 3.13
SSSCA1-205ENST00000527920 CACNG3O60359 315 aa34.62■■■■□ 3.13
SSSCA1-205ENST00000527920 PRKCSHP14314 528 aaPredicted RBP34.62■■■■□ 3.13
SSSCA1-205ENST00000527920 MAN2A1Q16706 1144 aa34.62■■■■□ 3.13
SSSCA1-205ENST00000527920 LAIR1Q6GTX8 287 aa34.62■■■■□ 3.13
SSSCA1-205ENST00000527920 PMF1Q6P1K2 205 aa34.62■■■■□ 3.13
SSSCA1-205ENST00000527920 IRGQQ8WZA9 623 aa34.62■■■■□ 3.13
SSSCA1-205ENST00000527920 APEX2Q9UBZ4 518 aa34.62■■■■□ 3.13
SSSCA1-205ENST00000527920 EBF1Q9UH73 591 aa34.62■■■■□ 3.13
SSSCA1-205ENST00000527920 MMP17Q9ULZ9 603 aa34.62■■■■□ 3.13
SSSCA1-205ENST00000527920 KIAA1549LQ6ZVL6 1849 aa34.62■■■■□ 3.13
SSSCA1-205ENST00000527920 APBB3O95704 486 aa34.61■■■■□ 3.13
SSSCA1-205ENST00000527920 DAOAP59103 153 aa34.61■■■■□ 3.13
SSSCA1-205ENST00000527920 SIM2Q14190 667 aaPredicted RBP34.61■■■■□ 3.13
SSSCA1-205ENST00000527920 BSPRYQ5W0U4 402 aa34.61■■■■□ 3.13
SSSCA1-205ENST00000527920 NUDT18Q6ZVK8 323 aa34.61■■■■□ 3.13
SSSCA1-205ENST00000527920 KCNV2Q8TDN2 545 aa34.61■■■■□ 3.13
SSSCA1-205ENST00000527920 BBS2Q9BXC9 721 aa34.61■■■■□ 3.13
SSSCA1-205ENST00000527920 ABCC13Q9NSE7 274 aa34.61■■■■□ 3.13
SSSCA1-205ENST00000527920 ATG2BQ96BY7 2078 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 MYOFQ9NZM1 2061 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 YJEFN3A6XGL0 299 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 E7ENQ6 273 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 KLKB1P03952 638 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 KRT5P13647 590 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 HOXC13P31276 330 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 SEC13P55735 322 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 KDSRQ06136 332 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 C2orf27AQ580R0 203 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 GPR161Q8N6U8 529 aaKnown RBP34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 PLD4Q96BZ4 506 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 XPO6Q96QU8 1125 aaKnown RBP34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 GMEB2Q9UKD1 530 aa34.6■■■■□ 3.13
SSSCA1-205ENST00000527920 GABBR2O75899 941 aa34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 SLC9A1P19634 815 aa34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 CHKAP35790 457 aa34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 KIR2DL1P43626 348 aaPredicted RBP34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 RPL34P49207 117 aaKnown RBP34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 RBM43Q6ZSC3 357 aaKnown RBP34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 NAT16Q8N8M0 369 aa34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 TERB1Q8NA31 727 aa34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 RNF139Q8WU17 664 aa34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 GAB3Q8WWW8 586 aa34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 NDRG1Q92597 394 aaKnown RBP34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 HHIPQ96QV1 700 aa34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 POLR3BQ9NW08 1133 aaPredicted RBP34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 HBS1LQ9Y450 684 aaKnown RBP34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 FRYLO94915 3013 aa34.59■■■■□ 3.13
SSSCA1-205ENST00000527920 NEDD8-MDP1E9PL57 170 aa34.58■■■■□ 3.13
SSSCA1-205ENST00000527920 MED7O43513 233 aa34.58■■■■□ 3.13
SSSCA1-205ENST00000527920 FBXO21O94952 628 aa34.58■■■■□ 3.13
SSSCA1-205ENST00000527920 TYRP14679 529 aa34.58■■■■□ 3.13
SSSCA1-205ENST00000527920 PON1P27169 355 aa34.58■■■■□ 3.13
SSSCA1-205ENST00000527920 CORO1AP31146 461 aaKnown RBP34.58■■■■□ 3.13
SSSCA1-205ENST00000527920 PRR23BQ6ZRT6 265 aa34.58■■■■□ 3.13
SSSCA1-205ENST00000527920 SFTPA1Q8IWL2 248 aa34.58■■■■□ 3.13
SSSCA1-205ENST00000527920 STK32AQ8WU08 396 aa34.58■■■■□ 3.13
SSSCA1-205ENST00000527920 SLC12A8A0AV02 714 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 GOLGA6L22H0YM25 854 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 LCP1P13796 627 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 GPD2P43304 727 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 RGS7P49802 495 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 SRSF5Q13243 272 aaKnown RBP34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 TRIP4Q15650 581 aaPredicted RBP34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 GRAMD4Q6IC98 578 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 TPGS1Q6ZTW0 290 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 DCLK2Q8N568 766 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 IL17RCQ8NAC3 791 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 GPT2Q8TD30 523 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 SHC3Q92529 594 aa34.57■■■■□ 3.12
SSSCA1-205ENST00000527920 TBC1D3BA6NDS4 549 aa34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 AXIN1O15169 862 aa34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 CALCAP01258 141 aa34.56■■■■□ 3.12
SSSCA1-205ENST00000527920 PXNP49023 591 aaPredicted RBP34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms