RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PDP2Q9P2J9 529 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 ZC3H7BQ9UGR2 993 aaKnown RBP12.98□□□□□ -0.33
CAPN1-208ENST00000527323 KRT19P08727 400 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 MIPP30301 263 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 STIP1P31948 543 aaKnown RBP12.97□□□□□ -0.33
CAPN1-208ENST00000527323 NAMPTP43490 491 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 RAP1GDS1P52306 607 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 CDH6P55285 790 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 GHRHRQ02643 423 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 LRRC36Q1X8D7 754 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 ZNF699Q32M78 642 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 ULK2Q8IYT8 1036 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 TRAPPC9Q96Q05 1148 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 TEX264Q9Y6I9 313 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 CXorf49A8MYA2 514 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-208ENST00000527323 USP1O94782 785 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 ADCYAP1R1P41586 468 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 OSTNP61366 133 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 DSG1Q02413 1049 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 TRMT5Q32P41 509 aaKnown RBP12.97□□□□□ -0.33
CAPN1-208ENST00000527323 CFAP157Q5JU67 520 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 ABHD15Q6UXT9 468 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 NET1Q7Z628 596 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-208ENST00000527323 CDR2LQ86X02 465 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-208ENST00000527323 RIOX2Q8IUF8 465 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 GPRC5AQ8NFJ5 357 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 ZCWPW1Q9H0M4 648 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 SMYD3Q9H7B4 428 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 ARHGEF4Q9NR80 690 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 PCMTD2Q9NV79 361 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 ETAA1Q9NY74 926 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 CNTN3Q9P232 1028 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 PLLPQ9Y342 182 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 MAD1L1Q9Y6D9 718 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 MYH9P35579 1960 aaKnown RBP12.97□□□□□ -0.33
CAPN1-208ENST00000527323 KAT6AQ92794 2004 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 PRR5-ARHGAP8B1AHC4 643 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 F8W8V4 182 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 SPAG6O75602 509 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 MAP3K6O95382 1288 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 UBA1P22314 1058 aaKnown RBP12.97□□□□□ -0.33
CAPN1-208ENST00000527323 INHBEP58166 350 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 ARHGAP8P85298 464 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 MROH9Q5TGP6 573 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 FOXB2Q5VYV0 432 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 XRRA1Q6P2D8 792 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 NDUFAF2Q8N183 169 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 PANX3Q96QZ0 392 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 ZNF302Q9NR11 478 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 USP18Q9UMW8 372 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 GINS2Q9Y248 185 aa12.97□□□□□ -0.33
CAPN1-208ENST00000527323 KCNN4O15554 427 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 TOM1L1O75674 476 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 TM7SF2O76062 418 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 EDN1P05305 212 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 LYNP07948 512 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 RAP1GAPP47736 663 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 DNAL1Q4LDG9 190 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 ZCCHC23Q6ZST2 131 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 SH2D5Q6ZV89 423 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 RSAD1Q9HA92 442 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 SLC7A8Q9UHI5 535 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 POLIQ9UNA4 740 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 HEY1Q9Y5J3 304 aa12.96□□□□□ -0.33
CAPN1-208ENST00000527323 TTLL13PA6NNM8 815 aa12.96□□□□□ -0.34
CAPN1-208ENST00000527323 MEI4A8MW99 385 aa12.96□□□□□ -0.34
CAPN1-208ENST00000527323 KLF11O14901 512 aa12.96□□□□□ -0.34
CAPN1-208ENST00000527323 APRTP07741 180 aa12.96□□□□□ -0.34
CAPN1-208ENST00000527323 SUPT20HL2P0C7V6 817 aa12.96□□□□□ -0.34
CAPN1-208ENST00000527323 STX3Q13277 289 aa12.96□□□□□ -0.34
CAPN1-208ENST00000527323 UBAP2LQ14157 1087 aaKnown RBP12.96□□□□□ -0.34
CAPN1-208ENST00000527323 WDR49Q8IV35 697 aa12.96□□□□□ -0.34
CAPN1-208ENST00000527323 BRSK2Q8IWQ3 736 aa12.96□□□□□ -0.34
CAPN1-208ENST00000527323 LRRN4Q8WUT4 740 aa12.96□□□□□ -0.34
CAPN1-208ENST00000527323 ECSITQ9BQ95 431 aa12.96□□□□□ -0.34
CAPN1-208ENST00000527323 CAPN14A8MX76 684 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 PIK3R2O00459 728 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 UGT1A9O60656 530 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 KRT38O76015 456 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 SRGAP2CP0DJJ0 459 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 GTF2A2P52657 109 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 AP3M2P53677 418 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 CAP1Q01518 475 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 GSTA3Q16772 222 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 CDO1Q16878 200 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 SCYL2Q6P3W7 929 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 LRRC71Q8N4P6 559 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 UBR7Q8N806 425 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 CEP120Q8N960 986 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 CDHR1Q96JP9 859 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 C7orf26Q96N11 449 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 NR1H4Q96RI1 486 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-208ENST00000527323 CPXM1Q96SM3 734 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 UGT1A7Q9HAW7 530 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 UGT1A10Q9HAW8 530 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 UGT1A8Q9HAW9 530 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.95□□□□□ -0.34
CAPN1-208ENST00000527323 CYTH4Q9UIA0 394 aa12.95□□□□□ -0.34
CAPN1-208ENST00000527323 PCDHGC3Q9UN70 934 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms