RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 CTC1Q2NKJ3 1217 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 C11orf91Q3C1V1 193 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 SLC45A4Q5BKX6 768 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 FAM26DQ5JW98 314 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 RNASEH2BQ5TBB1 312 aaKnown RBP8.17□□□□□ -1.1
SPIDR-223ENST00000524033 FAM91A1Q658Y4 838 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 PPP1R2P3Q6NXS1 205 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 TAF2Q6P1X5 1199 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 SV2AQ7L0J3 742 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 TAS1R3Q7RTX0 852 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 RSPH3Q86UC2 560 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 APLFQ8IW19 511 aaPredicted RBP8.17□□□□□ -1.1
SPIDR-223ENST00000524033 RHOT1Q8IXI2 618 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 ALLCQ8N6M5 410 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 TEX9Q8N6V9 391 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 RDM1Q8NG50 284 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 ASAP3Q8TDY4 903 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 MZB1Q8WU39 189 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 HPS1Q92902 700 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 NKD2Q969F2 451 aaPredicted RBP8.17□□□□□ -1.1
SPIDR-223ENST00000524033 TOP1MTQ969P6 601 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 ERP27Q96DN0 273 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 SAAL1Q96ER3 474 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 VCPIP1Q96JH7 1222 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 C9orf72Q96LT7 481 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 YME1L1Q96TA2 773 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 NTPCRQ9BSD7 190 aaKnown RBP8.17□□□□□ -1.1
SPIDR-223ENST00000524033 TRABDQ9H4I3 376 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 GPRC5CQ9NQ84 441 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 SAR1AQ9NR31 198 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 KCNH7Q9NS40 1196 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 ZNF358Q9NW07 568 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 SLC24A2Q9UI40 661 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 PHTF1Q9UMS5 762 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 SHOC2Q9UQ13 582 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 DRG1Q9Y295 367 aaKnown RBP8.17□□□□□ -1.1
SPIDR-223ENST00000524033 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.17□□□□□ -1.1
SPIDR-223ENST00000524033 PCDHB2Q9Y5E7 798 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 MCM3APO60318 1980 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 RASA4BC9J798 803 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 E7ESA3 106 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 DDX39AO00148 427 aaKnown RBP8.16□□□□□ -1.1
SPIDR-223ENST00000524033 NDC80O14777 642 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 PPP1R12AO14974 1030 aaPredicted RBP8.16□□□□□ -1.1
SPIDR-223ENST00000524033 ALOX15BO15296 676 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 RASA4O43374 803 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 PRMT3O60678 531 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 CLUHO75153 1309 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 STAU1O95793 577 aaKnown RBP8.16□□□□□ -1.1
SPIDR-223ENST00000524033 CALCAP01258 141 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 IL1BP01584 269 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 PIGRP01833 764 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 CHRNA1P02708 482 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 FGFR1P11362 822 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 TIMP2P16035 220 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 ACADSP16219 412 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 YWHABP31946 246 aaKnown RBP8.16□□□□□ -1.1
SPIDR-223ENST00000524033 ADCY8P40145 1251 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 NPTX2P47972 431 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 JAK3P52333 1124 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 ZNF132P52740 706 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 BPIFB4P59827 614 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 PSMC5P62195 406 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 IGBP1P78318 339 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 HTRA4P83105 476 aaPredicted RBP8.16□□□□□ -1.1
SPIDR-223ENST00000524033 MCL1Q07820 350 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 ZNF252P-AS1Q0IIN9 211 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 PSMD6Q15008 389 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 MORF4L2Q15014 288 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 GRIK4Q16099 956 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 SGSM1Q2NKQ1 1148 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 ZACNQ401N2 412 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 MARCH8Q5T0T0 291 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 LIN9Q5TKA1 542 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 LRRC38Q5VT99 294 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 LLGL2Q6P1M3 1020 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 OTOAQ7RTW8 1153 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.16□□□□□ -1.1
SPIDR-223ENST00000524033 GPD1LQ8N335 351 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 GLIS1Q8NBF1 620 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 GDPD5Q8WTR4 605 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 APBB2Q92870 758 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 TTC28Q96AY4 2481 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 SLITRK1Q96PX8 696 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 RBM15Q96T37 977 aaKnown RBP eCLIP8.16□□□□□ -1.1
SPIDR-223ENST00000524033 WDR83Q9BRX9 315 aaKnown RBP8.16□□□□□ -1.1
SPIDR-223ENST00000524033 C17orf80Q9BSJ5 609 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 PITPNM3Q9BZ71 974 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 C17orf75Q9HAS0 396 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 ETNK1Q9HBU6 452 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 PCDH9Q9HC56 1237 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 JPH1Q9HDC5 661 aaPredicted RBP8.16□□□□□ -1.1
SPIDR-223ENST00000524033 SAYSD1Q9NPB0 183 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 ZFATQ9P243 1243 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 SLC9A2Q9UBY0 812 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 STYXL1Q9Y6J8 313 aa8.16□□□□□ -1.1
SPIDR-223ENST00000524033 hCG_1818297A0A087WSY0 165 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 EXOC1LA0A1B0GW35 172 aa8.15□□□□□ -1.1
SPIDR-223ENST00000524033 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-223ENST00000524033 MBLAC1A4D2B0 266 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms