RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 MTMR9Q96QG7 549 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 LXNQ9BS40 222 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 TCHPQ9BT92 498 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 SLC46A2Q9BY10 475 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 C22orf23Q9BZE7 217 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 SEMA4CQ9C0C4 833 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 POLR3FQ9H1D9 316 aaPredicted RBP4.11□□□□□ -1.75
NPM1-210ENST00000523339 C2orf40Q9H1Z8 148 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 RPF1Q9H9Y2 349 aaKnown RBP4.11□□□□□ -1.75
NPM1-210ENST00000523339 CYP4F12Q9HCS2 524 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 GPRC5CQ9NQ84 441 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 HPS4Q9NQG7 708 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 CALCOCO1Q9P1Z2 691 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 CCL26Q9Y258 94 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 ACTL7BQ9Y614 415 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 WNT6Q9Y6F9 365 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 U3KQE9 123 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 CACNA1EQ15878 2313 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 PTPN13Q12923 2485 aa4.11□□□□□ -1.75
NPM1-210ENST00000523339 ABCA12Q86UK0 2595 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 SPTAN1Q13813 2472 aaKnown RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 TRAV19A0A0A6YYK7 116 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 OR6C75A6NL08 312 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 GOLGA8AA7E2F4 631 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 GOLGA8BA8MQT2 603 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 SGK1O00141 431 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 LAD1O00515 517 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 ZBTB43O43298 467 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 FZD6O60353 706 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 CBFA2T3O75081 653 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 RFPL3O75679 317 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 USP17L7P0C7H9 530 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 CDK4P11802 303 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 HARSP12081 509 aaKnown RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 HOXB2P14652 356 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 NMT1P30419 496 aaKnown RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 RPL9P32969 192 aaKnown RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 DDIT3P35638 169 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 WASP42768 502 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 MATR3P43243 847 aaKnown RBP eCLIP4.1□□□□□ -1.75
NPM1-210ENST00000523339 AFMP43652 599 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 GRIA4P48058 902 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 CCT8P50990 548 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 CDR1P51861 262 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 EXOSC10Q01780 885 aaKnown RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 KDSRQ06136 332 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 RESTQ13127 1097 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 CTTNQ14247 550 aaKnown RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 KCNB1Q14721 858 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 ZNF124Q15973 351 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 HSF5Q4G112 596 aaPredicted RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 ZNF648Q5T619 568 aaPredicted RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 HES3Q5TGS1 186 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 TXNDC8Q6A555 127 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 PAOXQ6QHF9 649 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 CCDC81Q6ZN84 652 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 GAREM2Q75VX8 874 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 RUFY3Q7L099 469 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 ZNF765Q7L2R6 523 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 TMC8Q8IU68 726 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 CHPFQ8IZ52 775 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 ZNF513Q8N8E2 541 aaPredicted RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 FSIP1Q8NA03 581 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 ATAD1Q8NBU5 361 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 C3orf58Q8NDZ4 430 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 OLIG1Q8TAK6 271 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 USP13Q92995 863 aaPredicted RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 PMEPA1Q969W9 287 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 LIN37Q96GY3 246 aaPredicted RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 PNKPQ96T60 521 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 LRRC2Q9BYS8 371 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 BHLHE41Q9C0J9 482 aaPredicted RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 PDZD7Q9H5P4 517 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 SOX17Q9H6I2 414 aaPredicted RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 DHX33Q9H6R0 707 aaKnown RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 ZSWIM4Q9H7M6 989 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 TTC12Q9H892 705 aaPredicted RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 IL21RQ9HBE5 538 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 ZDHHC4Q9NPG8 344 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 ANO2Q9NQ90 1003 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 ARHGEF4Q9NR80 690 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 DDX25Q9UHL0 483 aaKnown RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 TBX20Q9UMR3 447 aa4.1□□□□□ -1.75
NPM1-210ENST00000523339 TIMM13Q9Y5L4 95 aaPredicted RBP4.1□□□□□ -1.75
NPM1-210ENST00000523339 WDR81Q562E7 1941 aa4.09□□□□□ -1.75
NPM1-210ENST00000523339 CCDC196A0A1B0GTZ2 297 aa4.09□□□□□ -1.75
NPM1-210ENST00000523339 SMIM28A0A1B0GU29 152 aa4.09□□□□□ -1.75
NPM1-210ENST00000523339 A0A1B0GVT2 93 aa4.09□□□□□ -1.75
NPM1-210ENST00000523339 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
NPM1-210ENST00000523339 BTBD18B2RXH4 712 aa4.09□□□□□ -1.75
NPM1-210ENST00000523339 K7EQS6 105 aa4.09□□□□□ -1.75
NPM1-210ENST00000523339 SH2B2O14492 632 aaPredicted RBP4.09□□□□□ -1.75
NPM1-210ENST00000523339 ADAMTS3O15072 1205 aa4.09□□□□□ -1.75
NPM1-210ENST00000523339 BCAT2O15382 392 aaPredicted RBP4.09□□□□□ -1.75
NPM1-210ENST00000523339 USO1O60763 962 aaKnown RBP4.09□□□□□ -1.75
NPM1-210ENST00000523339 PSMD10O75832 226 aa4.09□□□□□ -1.75
NPM1-210ENST00000523339 KAT7O95251 611 aa4.09□□□□□ -1.75
NPM1-210ENST00000523339 BAG4O95429 457 aaKnown RBP4.09□□□□□ -1.75
NPM1-210ENST00000523339 LDOC1O95751 146 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms