RNA–Protein interactions for RNA: ENST00000522196.1

VIRMA-206, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 2

Gene VIRMA, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-206ENST00000522196 USP3Q9Y6I4 520 aa13.8□□□□□ -0.2
VIRMA-206ENST00000522196 SLC12A8A0AV02 714 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 M0QYV0 167 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 HOXC11O43248 304 aaPredicted RBP13.79□□□□□ -0.2
VIRMA-206ENST00000522196 TULP3O75386 442 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 CYBBP04839 570 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 TYRP14679 529 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 SDHBP21912 280 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 GBP1P32455 592 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 CHKAP35790 457 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 LMNB2Q03252 620 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 ADIGQ0VDE8 80 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 USP39Q53GS9 565 aaKnown RBP13.79□□□□□ -0.2
VIRMA-206ENST00000522196 C10orf76Q5T2E6 689 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 ANO7Q6IWH7 933 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 TRMT11Q7Z4G4 463 aaKnown RBP13.79□□□□□ -0.2
VIRMA-206ENST00000522196 C12orf40Q86WS4 652 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 ALLCQ8N6M5 410 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 TXNDC5Q8NBS9 432 aaKnown RBP13.79□□□□□ -0.2
VIRMA-206ENST00000522196 RBBP8NLQ8NC74 664 aaPredicted RBP13.79□□□□□ -0.2
VIRMA-206ENST00000522196 EZH1Q92800 747 aaPredicted RBP13.79□□□□□ -0.2
VIRMA-206ENST00000522196 WBP2Q969T9 261 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 CNOT6LQ96LI5 555 aaKnown RBP13.79□□□□□ -0.2
VIRMA-206ENST00000522196 UBE2TQ9NPD8 197 aaPredicted RBP13.79□□□□□ -0.2
VIRMA-206ENST00000522196 DACH1Q9UI36 760 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 MMP17Q9ULZ9 603 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 CFAP54Q96N23 3096 aa13.79□□□□□ -0.2
VIRMA-206ENST00000522196 WDR87Q6ZQQ6 2873 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 FANCMQ8IYD8 2048 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 ATG2BQ96BY7 2078 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 EP300Q09472 2414 aaPredicted RBP13.78□□□□□ -0.2
VIRMA-206ENST00000522196 TULP2O00295 520 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 O00370 1275 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 PES1O00541 588 aaKnown RBP13.78□□□□□ -0.2
VIRMA-206ENST00000522196 STC2O76061 302 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 CORO1AP31146 461 aaKnown RBP13.78□□□□□ -0.2
VIRMA-206ENST00000522196 HOXC13P31276 330 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 USP8P40818 1118 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 HARS2P49590 506 aaKnown RBP13.78□□□□□ -0.2
VIRMA-206ENST00000522196 RGS7P49802 495 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 MFAP3P55082 362 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 MARSP56192 900 aaKnown RBP13.78□□□□□ -0.2
VIRMA-206ENST00000522196 GCNT1Q02742 428 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 ELF2Q15723 593 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 CNGA2Q16280 664 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 GAB4Q2WGN9 574 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 HSF5Q4G112 596 aaPredicted RBP13.78□□□□□ -0.2
VIRMA-206ENST00000522196 RAB41Q5JT25 222 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 EMC10Q5UCC4 262 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 LCLAT1Q6UWP7 414 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 FAM114A1Q8IWE2 563 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 ZNF276Q8N554 614 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 FAM160A2Q8N612 972 aaPredicted RBP13.78□□□□□ -0.2
VIRMA-206ENST00000522196 KAT5Q92993 513 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 FAM81BQ96LP2 452 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 NUP62CLQ9H1M0 184 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 CLSTN2Q9H4D0 955 aa13.78□□□□□ -0.2
VIRMA-206ENST00000522196 CDV3Q9UKY7 258 aaKnown RBP13.78□□□□□ -0.2
VIRMA-206ENST00000522196 PRR5-ARHGAP8B1AHC4 643 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 PIK3R2O00459 728 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 MAP3K13O43283 966 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 MED7O43513 233 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 LRP3O75074 770 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 RHOBTB1O94844 696 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 BRD2P25440 801 aaKnown RBP13.77□□□□□ -0.21
VIRMA-206ENST00000522196 DGKGP49619 791 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 ARHGAP8P85298 464 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 CRY1Q16526 586 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 PM20D1Q6GTS8 502 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 GBP6Q6ZN66 633 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 ENOSF1Q7L5Y1 443 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 DENND1CQ8IV53 801 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 ARHGEF19Q8IW93 802 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 ZNF513Q8N8E2 541 aaPredicted RBP13.77□□□□□ -0.21
VIRMA-206ENST00000522196 KCTD13Q8WZ19 329 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 NDRG1Q92597 394 aaKnown RBP13.77□□□□□ -0.21
VIRMA-206ENST00000522196 EDEM1Q92611 657 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 CRACR2AQ9BSW2 395 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 TPSD1Q9BZJ3 242 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 CNGB3Q9NQW8 809 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 ST7Q9NRC1 585 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 ABCC13Q9NSE7 274 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 PLK2Q9NYY3 685 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 INVSQ9Y283 1065 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 MYO16Q9Y6X6 1858 aa13.77□□□□□ -0.21
VIRMA-206ENST00000522196 GOLGA6L22H0YM25 854 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 FOXD2O60548 495 aaPredicted RBP13.76□□□□□ -0.21
VIRMA-206ENST00000522196 PUM1Q14671 1186 aaKnown RBP eCLIP13.76□□□□□ -0.21
VIRMA-206ENST00000522196 ARHGAP44Q17R89 818 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 RSPO4Q2I0M5 234 aaPredicted RBP13.76□□□□□ -0.21
VIRMA-206ENST00000522196 BSPRYQ5W0U4 402 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 KBTBD6Q86V97 674 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 C11orf74Q86VG3 221 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 FMNL3Q8IVF7 1028 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 SFTPA1Q8IWL2 248 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 ETFBKMTQ8IXQ9 262 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 CHPFQ8IZ52 775 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 UBR7Q8N806 425 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 TERB1Q8NA31 727 aa13.76□□□□□ -0.21
VIRMA-206ENST00000522196 C12orf50Q8NA57 414 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms