RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 EPSTI1Q96J88 318 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 PNKPQ96T60 521 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 TEKT3Q9BXF9 490 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 NFKBIZQ9BYH8 718 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 HSD3B7Q9H2F3 369 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 TMPRSS4Q9NRS4 437 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 SPTLC3Q9NUV7 552 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 ZMYM5Q9UJ78 669 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 CCDC168Q8NDH2 2452 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 NUMA1Q14980 2115 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 A0A1B0GTQ1 180 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 M0R2N6 131 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 PPFIA2O75334 1257 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 BMP15O95972 392 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 APODP05090 189 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 SFTPCP11686 197 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 HOXB4P17483 251 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 DDX6P26196 483 aaKnown RBP eCLIP7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 GRIA2P42262 883 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 CD97P48960 835 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 PSMC5P62195 406 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 ARID5BQ14865 1188 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 TBR1Q16650 682 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 CDCP2Q5VXM1 449 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 PADI6Q6TGC4 694 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 KANSL1Q7Z3B3 1105 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 ADGRG2Q8IZP9 1017 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 LSMEM2Q8N112 164 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 PDILTQ8N807 584 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 STKLD1Q8NE28 680 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 TTC16Q8NEE8 873 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 APPL2Q8NEU8 664 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 SH3RF2Q8TEC5 729 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 CACTINQ8WUQ7 758 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 TCP11Q8WWU5 503 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 DHX58Q96C10 678 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 PRR11Q96HE9 360 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 ARHGAP9Q9BRR9 750 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 GEMIN8Q9NWZ8 242 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 GCNT4Q9P109 453 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 PCDHA4Q9UN74 947 aa7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 R3HCC1Q9Y3T6 440 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-227ENST00000521387 PMS2P1A4D2B8 440 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 M0QZQ0 153 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 IKBKBO14920 756 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 NFATC1O95644 943 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 CLDN1O95832 211 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 PRF1P14222 555 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 MCM7P33993 719 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 TRAPPC10P48553 1259 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 FANCCQ00597 558 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 KDSRQ06136 332 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 ILKQ13418 452 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 MORC3Q14149 939 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 MXD4Q14582 209 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 POSTNQ15063 836 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 DHCR24Q15392 516 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 NT5DC1Q5TFE4 455 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 RHBDF2Q6PJF5 856 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 EID2Q8N6I1 236 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 SAP25Q8TEE9 199 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 SMARCE1Q969G3 411 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 C18orf25Q96B23 403 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 PAGE5Q96GU1 130 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 GCNAQ96QF7 691 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 CCNL2Q96S94 520 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 MMS19Q96T76 1030 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 XPO4Q9C0E2 1151 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 KDM4CQ9H3R0 1056 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 POLR1BQ9H9Y6 1135 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 ARHGEF4Q9NR80 690 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 IFNKQ9P0W0 207 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 USP36Q9P275 1121 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 NUB1Q9Y5A7 615 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 RAD54BQ9Y620 910 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 OBSL1O75147 1896 aa7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 ZFC3H1O60293 1989 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-227ENST00000521387 LRRK1Q38SD2 2015 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 PHLPP2Q6ZVD8 1323 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 VWA3AA6NCI4 1184 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 MYMKA6NI61 221 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 TRIM24O15164 1050 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 DIAPH2O60879 1101 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 USP12O75317 370 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 SEMA7AO75326 666 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 SLFN14P0C7P3 912 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 TCF3P15923 654 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 CASP1P29466 404 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 NTSR1P30989 418 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 EIF2DP41214 584 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 UQCRFS1P47985 274 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 AFF3P51826 1226 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 OXCT1P55809 520 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 YWHAHQ04917 246 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 TFDP1Q14186 410 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 FAM187BQ17R55 369 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 EGFLAMQ63HQ2 1017 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 IGF2-ASQ6U949 168 aa7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 METTL3Q86U44 580 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-227ENST00000521387 MMP21Q8N119 569 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms