RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 MGAT4CQ9UBM8 478 aa4.7□□□□□ -1.66
LINC01088-211ENST00000515597 HEY2Q9UBP5 337 aa4.7□□□□□ -1.66
LINC01088-211ENST00000515597 VPS51Q9UID3 782 aa4.7□□□□□ -1.66
LINC01088-211ENST00000515597 ZMYM2Q9UBW7 1377 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 H3BNX3 289 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 PSG1P11464 419 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 CD19P15391 556 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 ATF7P17544 494 aaPredicted RBP4.69□□□□□ -1.66
LINC01088-211ENST00000515597 MCM5P33992 734 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 CARSP49589 748 aaKnown RBP4.69□□□□□ -1.66
LINC01088-211ENST00000515597 ID2Q02363 134 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 CFHR3Q02985 330 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 CFHR1Q03591 330 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 TWIST1Q15672 202 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 PLAG1Q6DJT9 500 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 MZT2AQ6P582 158 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 DCDC5Q6ZRR9 648 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 USP49Q70CQ1 688 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 UNC13DQ70J99 1090 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 C14orf80Q86SX3 495 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 ZDHHC12Q96GR4 267 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 SELENOOQ9BVL4 669 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 NKX1-2Q9UD57 310 aaPredicted RBP4.69□□□□□ -1.66
LINC01088-211ENST00000515597 SQORQ9Y6N5 450 aa4.69□□□□□ -1.66
LINC01088-211ENST00000515597 TLR2O60603 784 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 OAZ2O95190 189 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 MT-ND5P03915 603 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 STK3Q13188 491 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 CLCA4Q14CN2 919 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 ST3GAL2Q16842 350 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
LINC01088-211ENST00000515597 PPP4R4Q6NUP7 873 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 LIX1LQ8IVB5 337 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 SDR16C5Q8N3Y7 309 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 KAZALD1Q96I82 304 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 SNX22Q96L94 193 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 STRBPQ96SI9 672 aaKnown RBP4.68□□□□□ -1.66
LINC01088-211ENST00000515597 ZCWPW1Q9H0M4 648 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 POT1Q9NUX5 634 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 DNAJB11Q9UBS4 358 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 STEAP1Q9UHE8 339 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 ITGB1BP2Q9UKP3 347 aa4.68□□□□□ -1.66
LINC01088-211ENST00000515597 PRR23D1E9PI22 279 aaPredicted RBP4.67□□□□□ -1.66
LINC01088-211ENST00000515597 CRYABP02511 175 aaKnown RBP4.67□□□□□ -1.66
LINC01088-211ENST00000515597 PRR23D2P0DMB1 279 aaPredicted RBP4.67□□□□□ -1.66
LINC01088-211ENST00000515597 YPEL5P62699 121 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 SRSF1Q07955 248 aaKnown RBP eCLIP4.67□□□□□ -1.66
LINC01088-211ENST00000515597 KCNB1Q14721 858 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 MANEALQ5VSG8 457 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 RANBP10Q6VN20 620 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 C9orf47Q6ZRZ4 202 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 ANKRD13BQ86YJ7 626 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.67□□□□□ -1.66
LINC01088-211ENST00000515597 KRT78Q8N1N4 520 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 METTL25Q8N6Q8 603 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 PNPLA1Q8N8W4 532 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 IGFBPL1Q8WX77 278 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 EDC3Q96F86 508 aaKnown RBP4.67□□□□□ -1.66
LINC01088-211ENST00000515597 HS6ST2Q96MM7 605 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 HIST1H2AAQ96QV6 131 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 UNKQ9C0B0 810 aaKnown RBP4.67□□□□□ -1.66
LINC01088-211ENST00000515597 NUP62CLQ9H1M0 184 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 METTL14Q9HCE5 456 aaKnown RBP4.67□□□□□ -1.66
LINC01088-211ENST00000515597 WWOXQ9NZC7 414 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 ZNF212Q9UDV6 495 aa4.67□□□□□ -1.66
LINC01088-211ENST00000515597 COL15A1P39059 1388 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 F8W8V4 182 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 FOXN3O00409 490 aaPredicted RBP4.66□□□□□ -1.66
LINC01088-211ENST00000515597 TOMM40O96008 361 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 ANXA2P07355 339 aaKnown RBP4.66□□□□□ -1.66
LINC01088-211ENST00000515597 ADRA1DP25100 572 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 RBL1P28749 1068 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 COPAP53621 1224 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 DEUP1Q05D60 604 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 KCNAB1Q14722 419 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 CC2D1BQ5T0F9 858 aaKnown RBP4.66□□□□□ -1.66
LINC01088-211ENST00000515597 VSTM1Q6UX27 236 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 C12orf76Q8N812 135 aaPredicted RBP4.66□□□□□ -1.66
LINC01088-211ENST00000515597 NGDNQ8NEJ9 315 aaKnown RBP4.66□□□□□ -1.66
LINC01088-211ENST00000515597 PHKBQ93100 1093 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 FAM227BQ96M60 508 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 ASAP1Q9ULH1 1129 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 SLC27A6Q9Y2P4 619 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 PCDHGB6Q9Y5F9 930 aa4.66□□□□□ -1.66
LINC01088-211ENST00000515597 CNOT3O75175 753 aaKnown RBP4.65□□□□□ -1.67
LINC01088-211ENST00000515597 CTSAP10619 480 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 ATF3P18847 181 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 NTSR1P30989 418 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 HTR7P34969 479 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 ME1P48163 572 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 EIF4A1P60842 406 aaKnown RBP4.65□□□□□ -1.67
LINC01088-211ENST00000515597 SLC14A1Q13336 389 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 ANO7Q6IWH7 933 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 DEF8Q6ZN54 512 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 COLCA1Q6ZS62 124 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 ARFGAP1Q8N6T3 406 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 C11orf44Q8N8P7 122 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 SMRP1Q8NCR6 262 aa4.65□□□□□ -1.67
LINC01088-211ENST00000515597 DDX21Q9NR30 783 aaKnown RBP eCLIP4.65□□□□□ -1.67
LINC01088-211ENST00000515597 FZD4Q9ULV1 537 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms