RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 RESTQ13127 1097 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 CUL4AQ13619 759 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 SLC39A14Q15043 492 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 MDH1BQ5I0G3 518 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 TMEM164Q5U3C3 297 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 DAB2IPQ5VWQ8 1189 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 ANO7Q6IWH7 933 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 PSAPL1Q6NUJ1 521 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 FIGNL1Q6PIW4 674 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 TTC30AQ86WT1 665 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 CBWD2Q8IUF1 395 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 MYCBPAPQ8TBZ2 947 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 USP33Q8TEY7 942 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 STK32AQ8WU08 396 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 EZH1Q92800 747 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 PCED1BQ96HM7 432 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 SLITRK1Q96PX8 696 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 USP28Q96RU2 1077 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 ZCCHC2Q9C0B9 1178 aaKnown RBP9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 TNMDQ9H2S6 317 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 LINC00597Q9H2U6 94 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 SNX25Q9H3E2 840 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 CRTAC1Q9NQ79 661 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 HSPBP1Q9NZL4 362 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 MMP17Q9ULZ9 603 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 PTPRJQ12913 1337 aa9.47□□□□□ -0.89
CDC42SE2-212ENST00000515533 A0A087X0B3 334 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 LNP1A1A4G5 178 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 F8VP50 259 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 K7EQS6 105 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 KHNYNO15037 678 aaKnown RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 EIF3DO15371 548 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 ALDH1A2O94788 518 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 GNL1P36915 607 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 OPRD1P41143 372 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 DHPSP49366 369 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 NOVA1P51513 510 aaKnown RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 NOP14P78316 857 aaKnown RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 SLC7A9P82251 487 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 SHC2P98077 582 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 AMPD3Q01432 767 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 STK38Q15208 465 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 SNRNP35Q16560 246 aaKnown RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 WDR72Q3MJ13 1102 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 CRTC2Q53ET0 693 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 TDRD10Q5VZ19 366 aaKnown RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 PMS2CLQ68D20 193 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 TRAPPC11Q7Z392 1133 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 LIMS2Q7Z4I7 341 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 FILIP1Q7Z7B0 1213 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 DDX42Q86XP3 938 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 DEPDC4Q8N2C3 294 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 KIAA1958Q8N8K9 716 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 MDGA1Q8NFP4 955 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 OR6B3Q8NGW1 331 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 HPS3Q969F9 1004 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 SPACA7Q96KW9 195 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 CNOT6LQ96LI5 555 aaKnown RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 TTLL2Q9BWV7 592 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 ELOVL4Q9GZR5 314 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 ZSCAN16Q9H4T2 348 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 SMPD4Q9NXE4 827 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 INVSQ9Y283 1065 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 PCDHGC4Q9Y5F7 938 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 CPQQ9Y646 472 aa9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 MORC2Q9Y6X9 1032 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE2-212ENST00000515533 ZNF840PA6NDX5 716 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 C4orf47A7E2U8 309 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 A8MXQ7 604 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 DKK1O94907 266 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 STAU1O95793 577 aaKnown RBP9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 APODP05090 189 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 CYP17A1P05093 508 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 CENPBP07199 599 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 MBL2P11226 248 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 CYP2J2P51589 502 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 ASIC1P78348 528 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 MRPS21P82921 87 aaKnown RBP9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 ZXDBP98169 803 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 TAF10Q12962 218 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 TRPC3Q13507 836 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 DHCR24Q15392 516 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 TLR1Q15399 786 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 CRY1Q16526 586 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 FAM26FQ5R3K3 315 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 RASSF3Q86WH2 238 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 CCDC33Q8N5R6 958 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 GLIS3Q8NEA6 775 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 PDZD8Q8NEN9 1154 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 CCDC127Q96BQ5 260 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 C8orf48Q96LL4 319 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 PNKPQ96T60 521 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 MRPL45Q9BRJ2 306 aaKnown RBP9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 TRIM9Q9C026 710 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 RNF38Q9H0F5 515 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 CUEDC2Q9H467 287 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 ETNK1Q9HBU6 452 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 TMEM9BQ9NQ34 198 aa9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 BCCIPQ9P287 314 aaKnown RBP eCLIP9.45□□□□□ -0.9
CDC42SE2-212ENST00000515533 KLF15Q9UIH9 416 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms