RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	RNF34	Q969K3	372 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	PLD4	Q96BZ4	506 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	C18orf8	Q96DM3	657 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	ZNF830	Q96NB3	372 aa	Predicted RBP	7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	SERPINB11	Q96P15	392 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	CYP2S1	Q96SQ9	504 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	IER2	Q9BTL4	223 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	NAA15	Q9BXJ9	866 aa	Known RBP	7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	GAN	Q9H2C0	597 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	TMEM30A	Q9NV96	361 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	ASNSD1	Q9NWL6	643 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	SMPD4	Q9NXE4	827 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	MARCH2	Q9P0N8	246 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	CFAP97	Q9P2B7	532 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	WDR35	Q9P2L0	1181 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	RASAL2	Q9UJF2	1139 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	CA14	Q9ULX7	337 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	STAP1	Q9ULZ2	295 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	LUC7L2	Q9Y383	392 aa	Known RBP	7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	HBS1L	Q9Y450	684 aa	Known RBP	7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340	PIAS3	Q9Y6X2	628 aa		7.82	□□□□□ -1.16
NR1I3-231	ENST00000512340		A0A1W2PQJ5	194 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	KANSL1L	A0AUZ9	987 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	NARS	O43776	548 aa	Known RBP	7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	TADA3	O75528	432 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	F9	P00740	461 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	APOE	P02649	317 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	NCAM1	P13591	858 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	SCNN1A	P37088	669 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	DAOA	P59103	153 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	ZBED6	P86452	979 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	KLHL30	Q0D2K2	578 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	EFEMP1	Q12805	493 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	PDCL	Q13371	301 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	RUNX3	Q13761	415 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	NR1I3	Q14994	352 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	UBXN2B	Q14CS0	331 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	ZNF77	Q15935	545 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	DGKK	Q5KSL6	1271 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	SPECC1L	Q69YQ0	1117 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	ASTL	Q6HA08	431 aa	Predicted RBP	7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	DENND1B	Q6P3S1	775 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	TPRG1	Q6ZUI0	275 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	GPRIN1	Q7Z2K8	1008 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	FAM3C	Q92520	227 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	SYN2	Q92777	582 aa	Predicted RBP	7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	TRIM11	Q96F44	468 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	XPO6	Q96QU8	1125 aa	Known RBP	7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	RPP25	Q9BUL9	199 aa	Known RBP	7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	SLC4A5	Q9BY07	1137 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	IRX2	Q9BZI1	471 aa	Predicted RBP	7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	TRIM5	Q9C035	493 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	SMG9	Q9H0W8	520 aa	Known RBP	7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	CCSER2	Q9H7U1	834 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	TBC1D17	Q9HA65	648 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	POPDC2	Q9HBU9	364 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	IFNK	Q9P0W0	207 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	SIT1	Q9Y3P8	196 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	PTPRZ1	P23471	2315 aa	Predicted RBP	7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	GREB1	Q4ZG55	1949 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	USP34	Q70CQ2	3546 aa		7.81	□□□□□ -1.16
NR1I3-231	ENST00000512340	CFAP54	Q96N23	3096 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	DENND4C	Q5VZ89	1909 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	CACNA1A	O00555	2505 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	SLC12A8	A0AV02	714 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	FAM170B	A6NMN3	283 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340		E5RJQ4	531 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	ZBTB24	O43167	697 aa	Predicted RBP	7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	TEX33	O43247	280 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	ATG13	O75143	517 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	LATS1	O95835	1130 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	IRF1	P10914	325 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	ABCB4	P21439	1286 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	DRD1	P21728	446 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	RPL34	P49207	117 aa	Known RBP	7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	JAM2	P57087	298 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	STARD6	P59095	220 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	SLC6A3	Q01959	620 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	APBA1	Q02410	837 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	GAD2	Q05329	585 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	RING1	Q06587	406 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	NNT	Q13423	1086 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	GSE1	Q14687	1217 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	FBXO43	Q4G163	708 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	TDRD12	Q587J7	1177 aa	Known RBP	7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	HTR3D	Q70Z44	454 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	GPIHBP1	Q8IV16	184 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	PASD1	Q8IV76	773 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	SCUBE3	Q8IX30	993 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	SYNPO	Q8N3V7	929 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	ATP6V0D2	Q8N8Y2	350 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	RNF214	Q8ND24	703 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	FEZF2	Q8TBJ5	459 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	EPS8L1	Q8TE68	723 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	AGPAT1	Q99943	283 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	FAM83C	Q9BQN1	747 aa		7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	KLF16	Q9BXK1	252 aa	Predicted RBP	7.8	□□□□□ -1.16
NR1I3-231	ENST00000512340	PLA2G2F	Q9BZM2	168 aa		7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms