RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CLIP3Q96DZ5 547 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 ACTR8Q9H981 624 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 AVENQ9NQS1 362 aaPredicted RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 PEAK1Q9H792 1746 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CASTOR2A6NHX0 329 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 TRPC5OSA6NMA1 111 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RBAK-RBAKDNI3L0D1 243 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 ALBP02768 609 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 TGM2P21980 687 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 ANTXR2P58335 489 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 PTK7Q13308 1070 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RCN1Q15293 331 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 SMTNL2Q2TAL5 461 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 WLSQ5T9L3 541 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RBM43Q6ZSC3 357 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 TRAPPC11Q7Z392 1133 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 HOMEZQ8IX15 550 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 OXER1Q8TDS5 423 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CNDP1Q96KN2 507 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CCDC134Q9H6E4 229 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 XPNPEP3Q9NQH7 507 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 SH3BP4Q9P0V3 963 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 SMG5Q9UPR3 1016 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 ANO9A1A5B4 782 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 NCK2O43639 380 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 TSPAN3O60637 253 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 KLHL2O95198 593 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 HIST1H2ABP04908 130 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 SNRPAP09012 282 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 PABPC1P11940 636 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 FGFR4P22455 802 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 COPZ1P61923 177 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CSNK2BP67870 215 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CBWD3Q5JTY5 395 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CBWD5Q5RIA9 395 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 FAM171A1Q5VUB5 890 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 PRR5LQ6MZQ0 368 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 ESRP1Q6NXG1 681 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 HIST3H2AQ7L7L0 130 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 AHI1Q8N157 1196 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 FAM45AQ8TCE6 357 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 HIST1H2ACQ93077 130 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 SERPINB12Q96P63 405 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RBM15Q96T37 977 aaKnown RBP eCLIP5.95□□□□□ -1.463e-6■■□□□ 11.8
USP38-203ENST00000511739 CCSER1Q9C0I3 900 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RANBP17Q9H2T7 1088 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 TAF1DQ9H5J8 278 aaPredicted RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 PRKAG3Q9UGI9 489 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 NEU2Q9Y3R4 380 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 PCDHB2Q9Y5E7 798 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CDY2AQ9Y6F7 541 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CDY1Q9Y6F8 540 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CHD2O14647 1828 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 FAM220BPB1ANY3 271 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 SLC9A3R1O14745 358 aaPredicted RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 NKRFO15226 690 aaKnown RBP eCLIP5.95□□□□□ -1.46
USP38-203ENST00000511739 CST8O60676 142 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 DGKIO75912 1065 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 POMCP01189 267 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RBP3P10745 1247 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 FDFT1P37268 417 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 TALDO1P37837 337 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 ERFP50548 548 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 RAB27AP51159 221 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 BNC1Q01954 994 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 STX5Q13190 355 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 ITGA9Q13797 1035 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CBFBQ13951 182 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 CAMK1Q14012 370 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 PDIA5Q14554 519 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 SLC15A2Q16348 729 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 DNAL1Q4LDG9 190 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 SETMARQ53H47 684 aaPredicted RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 BOLA3Q53S33 107 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 TYW3Q6IPR3 259 aaKnown RBP5.95□□□□□ -1.46
USP38-203ENST00000511739 EPHX4Q8IUS5 362 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 STAG2Q8N3U4 1231 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 PHF20Q9BVI0 1012 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 EPC1Q9H2F5 836 aa5.95□□□□□ -1.46
USP38-203ENST00000511739 TRIM13O60858 407 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 KLHL18O94889 574 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CTDNEP1O95476 244 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 IGSF6O95976 241 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 PRR29P0C7W0 189 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CTNNB1P35222 781 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 PLOD1Q02809 727 aaPredicted RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 BYSLQ13895 437 aaKnown RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 INSCQ1MX18 579 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 NFRKBQ6P4R8 1299 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 TRAF7Q6Q0C0 670 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 POTEAQ6S8J7 498 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 CYP20A1Q6UW02 462 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 LRRC8DQ7L1W4 858 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 ZNF557Q8N988 423 aaPredicted RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 LEMD2Q8NC56 503 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 FAM136AQ96C01 138 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 MCCC1Q96RQ3 725 aaPredicted RBP5.94□□□□□ -1.46
USP38-203ENST00000511739 SLITRK2Q9H156 845 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 KLHL31Q9H511 634 aa5.94□□□□□ -1.46
USP38-203ENST00000511739 PSMC3IPQ9P2W1 217 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms