RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 LINC00473A8K010 186 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 EIF5BO60841 1220 aaKnown RBP8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 IL18RAPO95256 599 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 MYL1P05976 194 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 IL6RP08887 468 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 HMOX1P09601 288 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 CASP5P51878 434 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 INHBEP58166 350 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 ZNF543Q08ER8 600 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 SULT6B1Q6IMI4 303 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 ZNF551Q7Z340 670 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 GRASPQ7Z6J2 395 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 PNPLA8Q9NP80 782 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 SERTAD4Q9NUC0 356 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 SLC17A6Q9P2U8 582 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 TLK1Q9UKI8 766 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 CORO2BQ9UQ03 480 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 TBC1D30Q9Y2I9 924 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 SNX13Q9Y5W8 968 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 NCAPD2Q15021 1401 aa8.12□□□□□ -1.11
TRAPPC11-206ENST00000509857 LRRC37A3O60309 1634 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 ABCC4O15439 1325 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 PTPRCP08575 1304 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 KIAA0355O15063 1070 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 ONECUT2O95948 504 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 MT-ND5P03915 603 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 NR2F6P10588 404 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 ACVR2AP27037 513 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 LIPAP38571 399 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 AMPHP49418 695 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 ARHGEF7Q14155 803 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 PLAC9Q5JTB6 97 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 ZNF362Q5T0B9 420 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 FCRL6Q6DN72 434 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 KSR2Q6VAB6 950 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 UNC13DQ70J99 1090 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 SMC5Q8IY18 1101 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 ABRAQ8N0Z2 381 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 OSCP1Q8WVF1 389 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 SOCS4Q8WXH5 440 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 SNX22Q96L94 193 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 TIMP4Q99727 224 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 NAA15Q9BXJ9 866 aaKnown RBP8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 PRDM13Q9H4Q3 707 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 GLOD4Q9HC38 313 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 ZBTB40Q9NUA8 1239 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 SLIT3O75094 1523 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 NFAT5O94916 1531 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 ABCC6O95255 1503 aa8.11□□□□□ -1.11
TRAPPC11-206ENST00000509857 ZAR1LA6NP61 321 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 GCOM1H8Y6P7 765 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 RRP9O43818 475 aaKnown RBP8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 RASSF9O75901 435 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 INMTO95050 263 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 IGHDP01880 384 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 CARSP49589 748 aaKnown RBP8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 PRKAG1P54619 331 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 TWISTNBQ3B726 338 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 TREML2Q5T2D2 321 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 CERCAMQ5T4B2 595 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 YAF2Q8IY57 180 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 SDR16C5Q8N3Y7 309 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 IPCEF1Q8WWN9 437 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 IP6K1Q92551 441 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 GLG1Q92896 1179 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 PPP2R3CQ969Q6 453 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 COLEC11Q9BWP8 271 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 TRIM5Q9C035 493 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 ARHGEF3Q9NR81 526 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 TRMT13Q9NUP7 481 aaKnown RBP8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 MID2Q9UJV3 735 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 CAPN11Q9UMQ6 739 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 SNX14Q9Y5W7 946 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 OVOS2A0A0G2JMS6 1433 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 CRB1P82279 1406 aa8.1□□□□□ -1.11
TRAPPC11-206ENST00000509857 A1L4Q6 167 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 H7C4K7 107 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 TTLL1O95922 423 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 ANXA2P07355 339 aaKnown RBP8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 TSHRP16473 764 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 WT1P19544 449 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 ADORA2AP29274 412 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 HOXC9P31274 260 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 TM4SF4P48230 202 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 PRIM2P49643 509 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 CLCN2P51788 898 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 BCAT1P54687 386 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 IFIT5Q13325 482 aaKnown RBP8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 SLC29A2Q14542 456 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 PRIMA1Q86XR5 153 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 RNF152Q8N8N0 203 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 FAM98AQ8NCA5 519 aaKnown RBP8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 GCC1Q96CN9 775 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 UROC1Q96N76 676 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 DKK4Q9UBT3 224 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 HDAC9Q9UKV0 1011 aa8.09□□□□□ -1.11
TRAPPC11-206ENST00000509857 KPNA5O15131 536 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 ERBB2P04626 1255 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 HOXB7P09629 217 aa8.08□□□□□ -1.12
TRAPPC11-206ENST00000509857 PARP1P09874 1014 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms