RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 IFT74Q96LB3 600 aa10.25□□□□□ -0.77
PTPN20-221ENST00000509599 RNF38Q9H0F5 515 aa10.25□□□□□ -0.77
PTPN20-221ENST00000509599 OSGEPQ9NPF4 335 aa10.25□□□□□ -0.77
PTPN20-221ENST00000509599 SMPD4Q9NXE4 827 aa10.25□□□□□ -0.77
PTPN20-221ENST00000509599 CFAP97Q9P2B7 532 aa10.25□□□□□ -0.77
PTPN20-221ENST00000509599 PCDHA12Q9UN75 941 aa10.25□□□□□ -0.77
PTPN20-221ENST00000509599 PRRT4C9JH25 899 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 LAD1O00515 517 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 HOXC11O43248 304 aaPredicted RBP10.24□□□□□ -0.77
PTPN20-221ENST00000509599 BAG4O95429 457 aaKnown RBP10.24□□□□□ -0.77
PTPN20-221ENST00000509599 PDE6CP51160 858 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 RPL10AP62906 217 aaKnown RBP10.24□□□□□ -0.77
PTPN20-221ENST00000509599 ILKQ13418 452 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 SHBQ15464 509 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 WSCD1Q658N2 575 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 CCDC81Q6ZN84 652 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 DCP1BQ8IZD4 617 aaKnown RBP10.24□□□□□ -0.77
PTPN20-221ENST00000509599 THEM5Q8N1Q8 247 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 EID2Q8N6I1 236 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 SAP25Q8TEE9 199 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 AIFM3Q96NN9 605 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 C6orf106Q9H6K1 298 aaPredicted RBP10.24□□□□□ -0.77
PTPN20-221ENST00000509599 PLEKHA5Q9HAU0 1116 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 LRRC4CQ9HCJ2 640 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 DSEQ9UL01 958 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 CPQQ9Y646 472 aa10.24□□□□□ -0.77
PTPN20-221ENST00000509599 TDRD6O60522 2096 aaKnown RBP10.24□□□□□ -0.77
PTPN20-221ENST00000509599 TTLL8A6PVC2 850 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 LACTBL1A8MY62 500 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 CYB561D2O14569 222 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 DFNA5O60443 496 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 MED24O75448 989 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 OLFM2O95897 454 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 MT-CO3P00414 261 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 IGHDP01880 384 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 PFKLP17858 780 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 OXTRP30559 389 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 LSSP48449 732 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 NOLC1Q14978 699 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTPN20-221ENST00000509599 IGFBP7Q16270 282 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 CCDC142Q17RM4 750 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.23□□□□□ -0.77
PTPN20-221ENST00000509599 ARL13BQ3SXY8 428 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 SPATA1Q5VX52 437 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 C9orf57Q5W0N0 161 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 GALNT17Q6IS24 598 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 XKR5Q6UX68 686 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 METTL23Q86XA0 190 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 CATSPER3Q86XQ3 398 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 LSMEM2Q8N112 164 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 DRC1Q96MC2 740 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 NUP58Q9BVL2 599 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 HAPLN2Q9GZV7 340 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 PCED1AQ9H1Q7 454 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 RPF1Q9H9Y2 349 aaKnown RBP10.23□□□□□ -0.77
PTPN20-221ENST00000509599 NCOA5Q9HCD5 579 aaKnown RBP10.23□□□□□ -0.77
PTPN20-221ENST00000509599 ARHGAP28Q9P2N2 729 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 PLEKHB1Q9UF11 243 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-221ENST00000509599 ADAMTS1Q9UHI8 967 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-221ENST00000509599 PCDHB6Q9Y5E3 794 aa10.23□□□□□ -0.77
PTPN20-221ENST00000509599 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-221ENST00000509599 ZFHX3Q15911 3703 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 ARHGEF35A5YM69 484 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 CCDC169A6NNP5 214 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 GFRA2O00451 464 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 PIRO00625 290 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 EFSO43281 561 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 ITGAVP06756 1048 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 FAM87AP0C7U9 286 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 NPTX2P47972 431 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 CBLBQ13191 982 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 ORC1Q13415 861 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 NFE2Q16621 373 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-221ENST00000509599 EARS2Q5JPH6 523 aaKnown RBP10.22□□□□□ -0.77
PTPN20-221ENST00000509599 PPP1R26Q5T8A7 1209 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-221ENST00000509599 BTBD8Q5XKL5 378 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 GRAMD4Q6IC98 578 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 FAM124AQ86V42 546 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 TMEM25Q86YD3 366 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 TMPRSS6Q8IU80 811 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 LEO1Q8WVC0 666 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-221ENST00000509599 KIFAP3Q92845 792 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 EXTL1Q92935 676 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 MMS19Q96T76 1030 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 SEMA3CQ99985 751 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 PYM1Q9BRP8 204 aaKnown RBP10.22□□□□□ -0.77
PTPN20-221ENST00000509599 ORAI3Q9BRQ5 295 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 ARHGAP9Q9BRR9 750 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 EPN3Q9H201 632 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 POLR1BQ9H9Y6 1135 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 ABCB6Q9NP58 842 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 PGPEP1Q9NXJ5 209 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 TBC1D14Q9P2M4 693 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 KCNJ14Q9UNX9 436 aa10.22□□□□□ -0.77
PTPN20-221ENST00000509599 OTOGQ6ZRI0 2925 aa10.21□□□□□ -0.77
PTPN20-221ENST00000509599 FIGNL2A6NMB9 653 aa10.21□□□□□ -0.77
PTPN20-221ENST00000509599 XPOTO43592 962 aaKnown RBP10.21□□□□□ -0.77
PTPN20-221ENST00000509599 USP12O75317 370 aa10.21□□□□□ -0.77
PTPN20-221ENST00000509599 TOM1L1O75674 476 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms