RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 RPP40O75818 363 aaKnown RBP19.56■□□□□ 0.72
UBE3D-207ENST00000509102 CHKAP35790 457 aa19.56■□□□□ 0.72
UBE3D-207ENST00000509102 SLC6A11P48066 632 aa19.56■□□□□ 0.72
UBE3D-207ENST00000509102 MFAP3P55082 362 aa19.56■□□□□ 0.72
UBE3D-207ENST00000509102 LPAL2Q16609 132 aa19.56■□□□□ 0.72
UBE3D-207ENST00000509102 PM20D1Q6GTS8 502 aa19.56■□□□□ 0.72
UBE3D-207ENST00000509102 TRMT11Q7Z4G4 463 aaKnown RBP19.56■□□□□ 0.72
UBE3D-207ENST00000509102 TMEM25Q86YD3 366 aa19.56■□□□□ 0.72
UBE3D-207ENST00000509102 NAT16Q8N8M0 369 aa19.56■□□□□ 0.72
UBE3D-207ENST00000509102 TSTD1Q8NFU3 115 aa19.56■□□□□ 0.72
UBE3D-207ENST00000509102 EZH1Q92800 747 aaPredicted RBP19.56■□□□□ 0.72
UBE3D-207ENST00000509102 CNGB3Q9NQW8 809 aa19.56■□□□□ 0.72
UBE3D-207ENST00000509102 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.56■□□□□ 0.72
UBE3D-207ENST00000509102 AXIN1O15169 862 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 MED7O43513 233 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 HRO43593 1189 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 TULP3O75386 442 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 STC2O76061 302 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 ALDH1A2O94788 518 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 PXNP49023 591 aaPredicted RBP19.55■□□□□ 0.72
UBE3D-207ENST00000509102 EOGTQ5NDL2 527 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 GRAMD4Q6IC98 578 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 GBP6Q6ZN66 633 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 CLEC17AQ6ZS10 378 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 TPGS1Q6ZTW0 290 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 C12orf40Q86WS4 652 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 ARHGEF19Q8IW93 802 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 DCLK2Q8N568 766 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 GAB3Q8WWW8 586 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 KAT5Q92993 513 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 WBP2Q969T9 261 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 THAP9Q9H5L6 903 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 UBE2TQ9NPD8 197 aaPredicted RBP19.55■□□□□ 0.72
UBE3D-207ENST00000509102 ABCC13Q9NSE7 274 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 DNAJC17Q9NVM6 304 aaKnown RBP19.55■□□□□ 0.72
UBE3D-207ENST00000509102 MMP17Q9ULZ9 603 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 ZNF292O60281 2723 aa19.55■□□□□ 0.72
UBE3D-207ENST00000509102 OTOGLQ3ZCN5 2332 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 FRYLO94915 3013 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 TULP2O00295 520 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 RETP07949 1114 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 HMBSP08397 361 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 LCP1P13796 627 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 TYRP14679 529 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 BRD2P25440 801 aaKnown RBP19.54■□□□□ 0.72
UBE3D-207ENST00000509102 ERCC5P28715 1186 aaPredicted RBP19.54■□□□□ 0.72
UBE3D-207ENST00000509102 DGKEP52429 567 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 CACNA2D4Q7Z3S7 1137 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 ETFBKMTQ8IXQ9 262 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 KCNV2Q8TDN2 545 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 TFAP2BQ92481 460 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 PLD4Q96BZ4 506 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 MARK1Q9P0L2 795 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 EBF1Q9UH73 591 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 USP18Q9UMW8 372 aa19.54■□□□□ 0.72
UBE3D-207ENST00000509102 A0A0A0MRY4 1105 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 SLC12A8A0AV02 714 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 GTPBP10A4D1E9 387 aaKnown RBP19.53■□□□□ 0.72
UBE3D-207ENST00000509102 GREM1O60565 184 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 CYBBP04839 570 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 PRKCSHP14314 528 aaPredicted RBP19.53■□□□□ 0.72
UBE3D-207ENST00000509102 CORO1AP31146 461 aaKnown RBP19.53■□□□□ 0.72
UBE3D-207ENST00000509102 TIE1P35590 1138 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 HARS2P49590 506 aaKnown RBP19.53■□□□□ 0.72
UBE3D-207ENST00000509102 SRSF5Q13243 272 aaKnown RBP19.53■□□□□ 0.72
UBE3D-207ENST00000509102 EXOC3L4Q17RC7 722 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 C10orf76Q5T2E6 689 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 BSPRYQ5W0U4 402 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 TRIM65Q6PJ69 517 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 Q6ZNB5 142 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 SCML4Q8N228 414 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 CCDC33Q8N5R6 958 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 TERB1Q8NA31 727 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 IRGQQ8WZA9 623 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 HSFY1Q96LI6 401 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 CRACR2AQ9BSW2 395 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 POLMQ9NP87 494 aaPredicted RBP19.53■□□□□ 0.72
UBE3D-207ENST00000509102 ATG2BQ96BY7 2078 aa19.53■□□□□ 0.72
UBE3D-207ENST00000509102 RNF225M0QZC1 329 aaPredicted RBP19.52■□□□□ 0.72
UBE3D-207ENST00000509102 ZBTB24O43167 697 aaPredicted RBP19.52■□□□□ 0.72
UBE3D-207ENST00000509102 SART1O43290 800 aaKnown RBP19.52■□□□□ 0.72
UBE3D-207ENST00000509102 CACNG3O60359 315 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 LRP3O75074 770 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 FBXO21O94952 628 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 KLF8O95600 359 aaPredicted RBP19.52■□□□□ 0.72
UBE3D-207ENST00000509102 ID4P47928 161 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 RGS7P49802 495 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 ZNF132P52740 706 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 CRY1Q16526 586 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 MAN2A1Q16706 1144 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 PKDCCQ504Y2 493 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 USP39Q53GS9 565 aaKnown RBP19.52■□□□□ 0.72
UBE3D-207ENST00000509102 CT47A1Q5JQC4 288 aaPredicted RBP19.52■□□□□ 0.72
UBE3D-207ENST00000509102 SDE2Q6IQ49 451 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 C11orf74Q86VG3 221 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 ALLCQ8N6M5 410 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 TXNDC5Q8NBS9 432 aaKnown RBP19.52■□□□□ 0.72
UBE3D-207ENST00000509102 SLC35F5Q8WV83 523 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 KREMEN1Q96MU8 473 aa19.52■□□□□ 0.72
UBE3D-207ENST00000509102 APEX2Q9UBZ4 518 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms